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PLM1_100_coex_sep16_scaffold_1046

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1046_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1..333)
DNA (333bp) protein (111aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1046_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(343..780)
DNA (438bp) protein (146aa)
Mce-related protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Mce-related protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1046_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(805..1542)
DNA (738bp) protein (246aa)
Putative ABC transporter (ATP-binding protein) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1046_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1548..2342)
DNA (795bp) protein (265aa)
yrbE; toluene ABC transporter subunit membrane protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
toluene tolerance protein Ttg2B
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1046_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2339..4258)
DNA (1920bp) protein (640aa)
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1046_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4336..5196
DNA (861bp) protein (287aa)
Membrane protein-like protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1046_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5193..6215
DNA (1023bp) protein (341aa)
Fe-S protein, radical SAM family bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
radical SAM domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1046_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6212..6550
DNA (339bp) protein (113aa)
Radical SAM domain protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1046_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6562..7239
DNA (678bp) protein (226aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hopanoid-associated phosphorylase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1046_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7236..8180
DNA (945bp) protein (315aa)
Hopanoid-associated sugar epimerase bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
NAD-dependent dehydratase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1046_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8177..8824
DNA (648bp) protein (216aa)
squalene/phytoene synthase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
phytoene synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1046_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8838..9848
DNA (1011bp) protein (337aa)
alcohol dehydrogenase (EC:1.1.1.1) bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
alcohol dehydrogenase (EC:1.1.1.1)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1046_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9854..10879
DNA (1026bp) protein (342aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14) bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1046_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10876..11127
DNA (252bp) protein (84aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 14 items

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