ggKbase home page

PLM1_100_coex_sep16_scaffold_760_1

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1..171

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 56.0
  • Bit_score: 76
  • Evalue 7.80e-12
branched-chain amino acid ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 54.0
  • Bit_score: 59
  • Evalue 2.10e-07
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 51.0
  • Bit_score: 76
  • Evalue 8.40e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Betaproteobacteria_68_20 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
TTCGGGAAGAACGGCGAGTGGGCCAAGGGACGCACCCTCATGGTCCAGTACCAGAAGGTCCAAGGCACGGGCATCGATCAGTTCCGCGGGCCGGGCAAGAAGGTCGTGCTCTACCCCGACGAGCTCAAGTCCGGCACCATCATCTACCCGTACGCCGCGGCGAAGAACTAG
PROTEIN sequence
Length: 57
FGKNGEWAKGRTLMVQYQKVQGTGIDQFRGPGKKVVLYPDELKSGTIIYPYAAAKN*