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PLM1_100_coex_sep16_scaffold_760

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_760_1
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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1..171
DNA (171bp) protein (57aa)
Extracellular ligand-binding receptor bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM1_100_coex_sep16_scaffold_760_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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214..1056
DNA (843bp) protein (281aa)
Putative branched-chain amino acid ABC transporter permease component bin=GWC2_Methylomirabilis_70_16 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
livM; branched-chain amino acid ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_760_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1057..1992
DNA (936bp) protein (312aa)
Branched-chain amino acid transport system permease protein LivM bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livH; branched chain amino acid ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_760_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1997..2719
DNA (723bp) protein (241aa)
Putative branched-chain amino acid ABC transporter ATP-binding component bin=GWC2_Methylomirabilis_70_24 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
livG; branched-chain amino acid ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_760_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2709..3440
DNA (732bp) protein (244aa)
Branched-chain amino acid transport ATP-binding protein LivF bin=GWC2_Methylomirabilis_70_16 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_760_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3505..3870
DNA (366bp) protein (122aa)
hypothetical protein bin=bin7_NC10_sister species=Sporolactobacillus laevolacticus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_760_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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3881..4999
DNA (1119bp) protein (373aa)
Amidohydrolase Tax=Prochloron didemni P1-Palau RepID=G0XS52_PRODI
Uncharacterized protein {ECO:0000313|EMBL:ETW94082.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
TIM-barrel fold metal-dependent hydrolase
PLM1_100_coex_sep16_scaffold_760_8
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5039..5359)
DNA (321bp) protein (107aa)
Putative uncharacterized protein Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NWX0_CHRVO
Uncharacterized protein {ECO:0000313|EMBL:KIE18292.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K08D17.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_760_9
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5396..6289)
DNA (894bp) protein (298aa)
Tax=BJP_08E140C01_Syntrophobacterales_43_19
PLM1_100_coex_sep16_scaffold_760_10
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6413..7282)
DNA (870bp) protein (290aa)
Acid phosphatase Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZA06_AZOL4
acid phosphatase
Acid phosphatase {ECO:0000313|EMBL:CBS88401.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
PLM1_100_coex_sep16_scaffold_760_11
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(7279..7821)
DNA (543bp) protein (181aa)
Nucleoside 2-deoxyribosyltransferase Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W5P9_DESIS
nucleoside 2-deoxyribosyltransferase
Tax=BJP_IG2069_Spirochaetales_48_31
PLM1_100_coex_sep16_scaffold_760_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7863..8855
DNA (993bp) protein (331aa)
Nucleoside ABC transporter substrate-binding protein Tax=Thalassospira profundimaris WP0211 RepID=K2LS41_9PROT
Membrane protein {ECO:0000313|EMBL:KJB93437.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ABC transporter; periplasmic substrate-binding component
PLM1_100_coex_sep16_scaffold_760_13
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8859..9044
DNA (186bp) protein (62aa)
Putative ABC transporter ATP-binding protein YufO Tax=Sinorhizobium fredii USDA 257 RepID=I3XF00_RHIFR
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ12259.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
putative sugar ABC transporter ATP-binding protein
Displaying 13 items

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