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PLM1_100_coex_sep16_scaffold_1472_6

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3970..4692

Top 3 Functional Annotations

Value Algorithm Source
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 240.0
  • Bit_score: 419
  • Evalue 2.10e-114
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 237.0
  • Bit_score: 320
  • Evalue 2.20e-85
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 240.0
  • Bit_score: 423
  • Evalue 1.60e-115

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGGAAGGGCTGGTCGCCCAGGGGCTGCAGAAGTGGTTCAAGCACCGCAAGGTGGTGGACAATGTGTCCCTCGACATCCACCGCGGTGAGGTGGTCGGGTTGCTGGGGCCCAACGGCGCCGGCAAGACCACCTCGTTCTACATGATGGTTGGCTTGCTGCCGACCGAAGGCGGACGTATCTTTTTGGAAGGACAGGAGATCACCGAGCTCCCCATGTACCGGCGCTGCCGCTTGGGCGTGGGATATCTGCCCCAGGAGTCGTCGGTCTTCAGGAAGCTGACGGTCGAGGAAAACCTCATGGCGATCCTGGAGACGCTCGACGTGACCGCCGACGAGCGGCGGCAGCGGGCGCGCGACCTCCTCGCCGAGCTCGACCTGACGGCGCTGGCTCCGTACCCGGCCTACACGCTGTCGGGCGGCGAGCGGCGGCGGCTGGAGATCACGCGCGCGCTCATCACGTCGCCCCAGTACCTGCTCCTCGACGAGCCCTTCACCGGGATCGATCCCATCGCCATCGCGGACATCCAGGAGATCATCGCGCGGCTGCGCGACCGGGGCATCGGCATTCTCATCACCGATCACAACGTGCGCGAGACGCTGGCCATCACGGATCGCGCCTACATCCTCTACGAGGGTAAGATCCTCGTCTCGGGCACCGCCACCGAAATCGCCAACAATCCGATCGCCCGGGAGATCTATCTCGGGGAGAAATTCGCCCTCTAA
PROTEIN sequence
Length: 241
MEGLVAQGLQKWFKHRKVVDNVSLDIHRGEVVGLLGPNGAGKTTSFYMMVGLLPTEGGRIFLEGQEITELPMYRRCRLGVGYLPQESSVFRKLTVEENLMAILETLDVTADERRQRARDLLAELDLTALAPYPAYTLSGGERRRLEITRALITSPQYLLLDEPFTGIDPIAIADIQEIIARLRDRGIGILITDHNVRETLAITDRAYILYEGKILVSGTATEIANNPIAREIYLGEKFAL*