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PLM1_100_coex_sep16_scaffold_1472_7

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 4717..6174

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 487.0
  • Bit_score: 750
  • Evalue 1.10e-213
RNA polymerase sigma 54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 495.0
  • Bit_score: 431
  • Evalue 1.80e-118
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 485.0
  • Bit_score: 748
  • Evalue 5.60e-213

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGGCCATGGAAGCGCGCCTCTCACTTCGGCAGAGCCAGCGGGTCGTCATGACGCCGCTGCTGCAACAGGCCATCCAGCTGCTCCAGCTCTCCACGCTGGAGCTGCAGGAGGTCGTGCAGAAGGAGTTGCTCGAGAATCCGCTGCTGGAGGAGGTGGCCCCCGAGACCGACAGCCCGGAACAGGCCGCCGCCGCCGCCACCCCCGACGCGCCGGCGGCGACGCCGGTGGAGCCGGCGCCGGTCGACTCGTCGCCGACCTCGGAGCGGCAGACCGACGACCTGCCGTTCGATCTCAACGCGGTGATGTTCGACGATCACGAGGAGCGCTCACTGGTCGCCCAGGAGGATCGCGAGGAGCTGCCCTTCGAGAACATCGTGCGCTCGGTCAGCTCGCTCACCGACTACCTCGACGAGCAGATGCGCTTCACCTTCGAAGACCCGCTCATGCTCCGCATCGGCAACCAGATCATCGGCAACCTCGACGAGGACGGGTATCTCCGCGCCGAGCTGAGCGAGATCGCGGAAAAGTGTCAGACCACCGTCGACCAGGTCGAGAAGGTGCTGGTGCTGATCCAGGCGTTCGACCCGACGGGGGTGGCCGCCCGCTCCATCCAGGAGTGTCTGCTCATCCAGCTCCGGACCGATCCCAACCCGGACCCGGTGTCGGTGGAGATCGTCGAGGAACACTTCGACGAGCTGAGCCGGCGGCGGTATCCCGACATCGCCCGCGCCCTGAAGCTGCCGCTCGACCGCGTGATGGAGTCGGTCGAGGAGATCATGGGGCTGGAGCCCAAGCCCGGCCGCCGCTTCGGCGGCACCGACTCGCGCTACATCGTGGCGGACGTCGTCGTGCACAAGATGGGCGGCGAGTACGTGGTGGTCCTCAACGAGGAGGGCATCCCGCGGCTGCGGGTGAACTCGCTGTACCGTTCGCTGCTGCGCGGCTCCGGTGACGAGGCGCGCGCCTACGTGGAACAGAAGCTGCGCTCGGCCGTGTGGCTGATCAAGTCGGTCGACCAGCGCCAGCGCACGCTACGGAAGGTGACGCAATCCATCGTCAAGTTCCAGCGCGACTTCCTCGACAAGGGCCTGCCGTGCCTGCGTCCGCTCTCGCTGCGCGACGTGGGTGAGGACATCGGCATGCACGAGTCGACGATCAGCCGCGTGACCACGAACAAGTACGTCGAGACGCCCCAGGGATTGTTCGAGCTCAAGTTCTTCTTCCACAGCGGCATCGCCTCCGGCGACGGCGAGATGGTGTCCTCGGTGTCGGTCAAGAAGATGATCCAGGACCTGCTGGCCAACGAGGACGCCGCCAAGCCCCTCTCGGACCAGGAGGTCGCCCAGATCCTCAAGGGTCGCGGACTCACCATCGCGCGGCGAACCGTGGCGAAGTACCGCGAAGAGCTGGGAATCCTCCCGTCTCACCAGCGCCGCCTGGCGCCGAAGCGACGCTGA
PROTEIN sequence
Length: 486
MAMEARLSLRQSQRVVMTPLLQQAIQLLQLSTLELQEVVQKELLENPLLEEVAPETDSPEQAAAAATPDAPAATPVEPAPVDSSPTSERQTDDLPFDLNAVMFDDHEERSLVAQEDREELPFENIVRSVSSLTDYLDEQMRFTFEDPLMLRIGNQIIGNLDEDGYLRAELSEIAEKCQTTVDQVEKVLVLIQAFDPTGVAARSIQECLLIQLRTDPNPDPVSVEIVEEHFDELSRRRYPDIARALKLPLDRVMESVEEIMGLEPKPGRRFGGTDSRYIVADVVVHKMGGEYVVVLNEEGIPRLRVNSLYRSLLRGSGDEARAYVEQKLRSAVWLIKSVDQRQRTLRKVTQSIVKFQRDFLDKGLPCLRPLSLRDVGEDIGMHESTISRVTTNKYVETPQGLFELKFFFHSGIASGDGEMVSSVSVKKMIQDLLANEDAAKPLSDQEVAQILKGRGLTIARRTVAKYREELGILPSHQRRLAPKRR*