ggKbase home page

PLM1_100_coex_sep16_scaffold_1196_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1744..2718)

Top 3 Functional Annotations

Value Algorithm Source
rne; Ribonuclease E (EC:3.1.4.-) similarity KEGG
DB: KEGG
  • Identity: 28.8
  • Coverage: 292.0
  • Bit_score: 67
  • Evalue 4.50e-09
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970, ECO:0000313|EMBL:CBJ38202.1}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.8
  • Coverage: 292.0
  • Bit_score: 67
  • Evalue 2.30e-08
Ribonuclease E Tax=Ralstonia solanacearum CMR15 RepID=D8NCL4_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 28.8
  • Coverage: 292.0
  • Bit_score: 67
  • Evalue 1.60e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGATCCATCGCCGGGAACACCGCCAGCAGCGCGCCGGCCAGCGCGGCCAGCGCCCCCAGCACGATGGCCCCCGGCGCCAGCGCGGCGACGCCCCCGGTGCGCACGGCCGCGGCGACCACCCCCCCGCCGCGCGCGGCCGCGGTCACCGCCAGCGCCGCGCCGAACGCGGCCACCACGGTGGCGCCGGTGGGCAGATCCCACCGGTAGGACGCGAGGAGGCCGGCGGCGCTCACCACCCCACCGGCGGCCCAGCCGAGTGCCAGCCGCGTGGCGACGCCGCGCGCGAGCAGCGTCGCGATCGCCGCCGGCACCACGAGGAACGCGAACACCAGCAGCACGCCGGCCACCCGCACCGAGCTGGTGACGACCAGCGCGAACGAGGCGTAGAAGAGCGCGTCCCAGCCGATGACCCGGGCGCCGGCGGCGTCGCCAGACGCAAAGGAGATGGCCAGCAGCGGACGCCGGGCCAGCCAGTGCACGAGCCCGACCCCGGCGTAGAGCCCAGCCAGTCCGGCCACGTCGGCGCCGCTGACGGTGAGGATCGAGCCGACCAGCAGCTGCTTGATGTGCTCGGCGCCCTGGGGCGCGCGGTCCACGACGAGCACGGTGAGCGCGGCCGACACCGCGTAGACGATGCCGATGATCGCCTCCTGGGGGATCGGCGCCCGCCGCACGCGCGTGACCGCGAACACGAGCCCGCCGGCCACGGCGAACGCCAGCGCGTACCAGTAGGCGGCCGCGCTCGCCGGCGGATGGCCGGCCAGGAGCGCGACGGTGAGCCCGAGTGCGGCGATCTGGGCGAGGGCGAGGTCCACGAAGATCACCCCGCGCGCGAGCACGTGCAGGCCGAGGTAGGCGTGGATGCCGGTGAGGACCAGGCACGCCACGAACGGCAGCGCCAGGAGGTCGATCACCGTGCGGCCGCCAGCGCCTCGGCCAGCCGCGTCACGTTGAGGTCGAACAGGGCGACGTAG
PROTEIN sequence
Length: 325
MIHRREHRQQRAGQRGQRPQHDGPRRQRGDAPGAHGRGDHPPAARGRGHRQRRAERGHHGGAGGQIPPVGREEAGGAHHPTGGPAECQPRGDAAREQRRDRRRHHEEREHQQHAGHPHRAGDDQRERGVEERVPADDPGAGGVARRKGDGQQRTPGQPVHEPDPGVEPSQSGHVGAADGEDRADQQLLDVLGALGRAVHDEHGERGRHRVDDADDRLLGDRRPPHARDREHEPAGHGERQRVPVGGRARRRMAGQERDGEPECGDLGEGEVHEDHPAREHVQAEVGVDAGEDQARHERQRQEVDHRAAASASASRVTLRSNRAT*