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PLM1_100_coex_sep16_scaffold_1196

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1196_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2..1012
DNA (1011bp) protein (337aa)
acetamidase/formamidase bin=bin7_NC10_sister species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acetamidase/formamidase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_1196_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1019..1807
DNA (789bp) protein (263aa)
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein bin=bin7_NC10_sister species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
periplasmic solute binding protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_1196_3
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1744..2718)
DNA (975bp) protein (325aa)
rne; Ribonuclease E (EC:3.1.4.-)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970, ECO:0000313|EMBL:CBJ38202.1}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
Ribonuclease E Tax=Ralstonia solanacearum CMR15 RepID=D8NCL4_RALSL
PLM1_100_coex_sep16_scaffold_1196_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3013..3849)
DNA (837bp) protein (279aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
3-hydroxyacyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1196_5
unknown

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comp(3934..4248)
DNA (315bp) protein (105aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1196_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4356..4889)
DNA (534bp) protein (178aa)
apt; Adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1196_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4944..5558)
DNA (615bp) protein (205aa)
Putative hydrolase (HAD superfamily) bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HAD family hydrolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1196_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5690..6466)
DNA (777bp) protein (259aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA dehydratase, EchA8_3 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1196_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6466..6783)
DNA (318bp) protein (106aa)
Rhodanese domain protein bin=GWA2_Methylomirabilis_73_35 species=Kingella denitrificans genus=Kingella taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rhodanese-like protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1196_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6783..7634)
DNA (852bp) protein (284aa)
Alpha/beta hydrolase fold protein bin=GWA2_Methylomirabilis_73_35 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase fold protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1196_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(7647..8657)
DNA (1011bp) protein (337aa)
D-cysteine desulfhydrase (EC:3.5.99.7)
D-cysteine desulfhydrase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1196_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8671..9594)
DNA (924bp) protein (308aa)
hypothetical protein bin=bin7_NC10_sister species=Thermus thermophilus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 12 items

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