ggKbase home page

PLM1_30_b1_sep16_scaffold_879

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_879_1

Not on your lists

166..1356
DNA (1191bp) protein (397aa)
hypothetical protein Tax=Saccharomonospora saliphila RepID=UPI00036BDDF0
Uncharacterized protein {ECO:0000313|EMBL:KGA17865.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
putative oxidoreductase
PLM1_30_b1_sep16_scaffold_879_2
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1353..2270)
DNA (918bp) protein (306aa)
Xylose isomerase domain protein TIM barrel Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSE5_ACIC1
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABK52355.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_879_3
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2267..2722)
DNA (456bp) protein (152aa)
Oxidoreductase domain protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSE4_ACIC1
oxidoreductase domain-containing protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM1_30_b1_sep16_scaffold_879_4
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2719..3393)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Oceanicola granulosus HTCC2516 RepID=Q2CIQ8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAR52531.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
oxidoreductase-like protein
PLM1_30_b1_sep16_scaffold_879_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3395..4381)
DNA (987bp) protein (329aa)
hypothetical protein Tax=Saccharomonospora saliphila RepID=UPI000377B646
inner-membrane translocator
Monosaccharide ABC transporter membrane protein, CUT2 family {ECO:0000313|EMBL:ABK52353.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_879_6
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4378..5388)
DNA (1011bp) protein (337aa)
Monosaccharide ABC transporter membrane protein, CUT2 family Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSE2_ACIC1
inner-membrane translocator
Monosaccharide ABC transporter membrane protein, CUT2 family {ECO:0000313|EMBL:ABK52352.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_879_7
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5385..6869)
DNA (1485bp) protein (495aa)
hypothetical protein Tax=Saccharomonospora saliphila RepID=UPI00037B65F1
ABC transporter-like protein
Monosaccharide ABC transporter ATP-binding protein, CUT2 family {ECO:0000313|EMBL:ABK52351.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_879_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6889..7950)
DNA (1062bp) protein (354aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSE0_ACIC1
periplasmic binding protein/LacI transcriptional regulator
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:ABK52350.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_879_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7947..8732)
DNA (786bp) protein (262aa)
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain-like protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSD9_ACIC1
hypothetical protein
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain-like protein {ECO:0000313|EMBL:ABK52349.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_879_10
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8780..9508
DNA (729bp) protein (243aa)
Transcriptional regulator, GntR family Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSD7_ACIC1
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABK52347.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_879_11
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9530..9826)
DNA (297bp) protein (99aa)
RpiR family transcriptional regulator (EC:2.7.1.2)
Glucokinase {ECO:0000313|EMBL:ABK52346.1}; EC=2.7.1.2 {ECO:0000313|EMBL:ABK52346.1};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Glucokinase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSD6_ACIC1
PLM1_30_b1_sep16_scaffold_879_12
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(10476..10967)
DNA (492bp) protein (164aa)
Deoxyribose-phosphate aldolase Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BDI0_MEISD
deoxyribose-phosphate aldolase
Tax=RBG_13_Chloroflexi_50_21_curated
PLM1_30_b1_sep16_scaffold_879_13
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11186..11950)
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSD4_ACIC1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABK52344.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_879_14
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12000..12845)
DNA (846bp) protein (282aa)
Aryldialkylphosphatase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSD3_ACIC1
aryldialkylphosphatase
Aryldialkylphosphatase {ECO:0000313|EMBL:ABK52343.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_879_15
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12842..14179)
DNA (1338bp) protein (446aa)
Fumarate reductase/succinate dehydrogenase flavoprotein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSD2_ACIC1
fumarate reductase/succinate dehydrogenase flavoprotein
Fumarate reductase/succinate dehydrogenase flavoprotein {ECO:0000313|EMBL:ABK52342.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_879_16
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14358..15248
DNA (891bp) protein (297aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00036FAF69
Uncharacterized protein {ECO:0000313|EMBL:KJK54058.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
polyphosphate:nucleotide phosphotransferase
PLM1_30_b1_sep16_scaffold_879_17
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15289..17016
DNA (1728bp) protein (576aa)
Sulfate transporter Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EGN4_STRRM
Transporter {ECO:0000313|EMBL:KJY18221.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
sulfate transporter
PLM1_30_b1_sep16_scaffold_879_18
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17059..18258)
DNA (1200bp) protein (400aa)
Uncharacterized protein Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AJS7_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN48795.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
Displaying 18 items

View Taxonomy