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PLM1_30_b1_sep16_scaffold_1143

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_1143_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..476
DNA (474bp) protein (158aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; Flags: Fragment;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
S-adenosylmethionine: tRNA ribosyltransferase-isomerase Tax=Streptomyces collinus Tu 365 RepID=S5US45_STRCU
S-adenosylmethionine: tRNA ribosyltransferase-isomerase
PLM1_30_b1_sep16_scaffold_1143_2
unknown

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562..1251
DNA (690bp) protein (230aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_1143_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1268..3247
DNA (1980bp) protein (660aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035F3096
uroporphyrin-III C/tetrapyrrole methyltransferase
PLM1_30_b1_sep16_scaffold_1143_4
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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3298..4860
DNA (1563bp) protein (521aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Methionine--tRNA ligase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LR90_ACIC1
PLM1_30_b1_sep16_scaffold_1143_5

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4857..5402
DNA (546bp) protein (182aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00036858B1
Marine sediment metagenome DNA, contig: S01H4_S09043 {ECO:0000313|EMBL:GAH01448.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_1143_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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5412..7091
DNA (1680bp) protein (560aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEK5_GEOOG
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_1143_7
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7109..7894
DNA (786bp) protein (262aa)
Putative uncharacterized protein Tax=Streptomyces sp. Tu6071 RepID=F3Z7J3_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ78540.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu6071.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_1143_8
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(7863..10496)
DNA (2634bp) protein (878aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003655E24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL89885.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_30_b1_sep16_scaffold_1143_9
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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10579..11364
DNA (786bp) protein (262aa)
Hydrolase, TatD family Tax=Saccharomonospora glauca K62 RepID=I1D6A2_9PSEU
Hydrolase, TatD family {ECO:0000313|EMBL:EIF00477.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
TatD family hydrolase
PLM1_30_b1_sep16_scaffold_1143_10
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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11357..12214
DNA (858bp) protein (286aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|SAAS:SAAS00090350}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00275485};; EC=2.7.1.148 {ECO:0000256|SAAS:SAAS00090262};; species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii C83.;"
Putative uncharacterized protein Tax=Actinomyces graevenitzii C83 RepID=G9PHP5_9ACTO
ksgA; ribosomal RNA small subunit methyltransferase A
PLM1_30_b1_sep16_scaffold_1143_11
unknown

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12271..12465
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 11 items

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