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PLM1_30_b1_sep16_scaffold_3497

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_3497_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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2..1486
DNA (1485bp) protein (495aa)
Multi-sensor signal transduction histidine kinase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UF65_ANASK
multi-sensor signal transduction histidine kinase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_3497_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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1549..2397
DNA (849bp) protein (283aa)
hypothetical protein Tax=actinobacterium SCGC AAA015-M09 RepID=UPI000364BE07
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_3497_3
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2526..4361
DNA (1836bp) protein (612aa)
Lysine 2,3-aminomutase Tax=Cystobacter fuscus DSM 2262 RepID=S9PN65_9DELT
Lysine 2,3-aminomutase {ECO:0000313|EMBL:KFA94660.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
kamA1; putative L-lysine 2,3-aminomutase
PLM1_30_b1_sep16_scaffold_3497_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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4380..5069
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6H7W1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETK37509.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_3497_5
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5093..5644)
DNA (552bp) protein (184aa)
PF06475 family protein Tax=Burkholderia multivorans ATCC BAA-247 RepID=J5B5K9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEE00152.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD1.;"
PLM1_30_b1_sep16_scaffold_3497_6

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comp(5652..7052)
DNA (1401bp) protein (467aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A2L1_9ACTN
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KGA18450.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
PLM1_30_b1_sep16_scaffold_3497_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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7188..8678
DNA (1491bp) protein (497aa)
AMP-dependent synthetase and ligase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C738_SPHTD
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACZ37799.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_30_b1_sep16_scaffold_3497_8
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8772..9686)
DNA (915bp) protein (305aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00036C8F38
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY85439.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM1_30_b1_sep16_scaffold_3497_9
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9776..10519
DNA (744bp) protein (248aa)
end; Putative endonuclease IV End (endodeoxyribonuclease IV) (apurinase) (EC:3.1.21.2)
Probable endonuclease 4 Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QFB4_9MYCO
Putative endonuclease IV END (Endodeoxyribonuclease IV) (Apurinase) {ECO:0000313|EMBL:CCC43010.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
PLM1_30_b1_sep16_scaffold_3497_10
unknown

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10559..10783
DNA (225bp) protein (75aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_3497_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10790..11038)
DNA (249bp) protein (83aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000368DDF2
Uncharacterized protein {ECO:0000313|EMBL:ETK34453.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_3497_12
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(11087..12316)
DNA (1230bp) protein (410aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Cysteine--tRNA ligase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBE9_THET1
PLM1_30_b1_sep16_scaffold_3497_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12333..13415
DNA (1083bp) protein (361aa)
Putative amidohydrolase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HFL6_ACTM4
Imidazolonepropionase and related amidohydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_3497_14
unknown

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13654..13923
DNA (270bp) protein (90aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_3497_15
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(13979..14326)
DNA (348bp) protein (116aa)
Transcriptional regulator, Fur family Tax=Dermacoccus sp. Ellin185 RepID=E3B7W8_9MICO
peptide ABC transporter substrate-binding protein
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EFP58853.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
PLM1_30_b1_sep16_scaffold_3497_16
unknown

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14379..14549
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 16 items

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