ggKbase home page

PLM1_30_b1_sep16_scaffold_671_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1234..1812

Top 3 Functional Annotations

Value Algorithm Source
def; peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 169.0
  • Bit_score: 166
  • Evalue 4.30e-39
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 169.0
  • Bit_score: 166
  • Evalue 2.10e-38
peptide deformylase Tax=Streptomyces scabrisporus RepID=UPI000371A5F6 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 181.0
  • Bit_score: 168
  • Evalue 5.20e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinoplanes friuliensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGGCAGTGCTCGAGATCCGGCTGTTCGGCGACCCGGTCCTGACCCAGAGGTCGGACCCGGTGACCCGGTTCGACGCCGAGCTGGCCCGCTTCGGCGACGACCTGCTGGAGACCCTCCAGTTCGCCCACGGCGCCGGCCTGGCCGCCCCCCAGGTCGGCGTGCTCAAGCGCATGTTCGCCTACGACATCCCGGCCGATGAGGAGACCGGCGAGCACCCCTTTGGGGTGCTGGTCAACCCGGTCATCACCCGCTGGGAGGGCGAGCAGGACGGCGAGGAGGGCTGCCTGTCCTTCCCCGGCATCTACTACGCCTGCAAGCGGGCCATGGAGGTCACCGTGGCCGCCGTGGACGTCCGCGGCCAGCCGCTGGAGCTGGACGGCGAGGGGCTGCTGGCCCGCTGCATCCAGCACGAGGTCGACCACCTGGACGGGGTGCTGTTCATCGAGCGGCTGTCCCGGGGCGACCGCAAGCGGGCCCTCAAGCAGTGGCGGGAGCGCGAGTTCGACCTCGAGCTCGAGGGGTTCGAGCCGCATCTGCACCGGTCCGACCTGACCATCAAGCCCGACAAGACCTTCTAG
PROTEIN sequence
Length: 193
VAVLEIRLFGDPVLTQRSDPVTRFDAELARFGDDLLETLQFAHGAGLAAPQVGVLKRMFAYDIPADEETGEHPFGVLVNPVITRWEGEQDGEEGCLSFPGIYYACKRAMEVTVAAVDVRGQPLELDGEGLLARCIQHEVDHLDGVLFIERLSRGDRKRALKQWREREFDLELEGFEPHLHRSDLTIKPDKTF*