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PLM1_30_coex_sep16_scaffold_3112_4

Organism: PLM1_30_coex_sep16_Rokubacteria_70_9

near complete RP 46 / 55 MC: 7 BSCG 47 / 51 MC: 4 ASCG 10 / 38
Location: comp(3850..4569)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 233.0
  • Bit_score: 362
  • Evalue 1.80e-97
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 227.0
  • Bit_score: 302
  • Evalue 6.20e-80
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 238.0
  • Bit_score: 407
  • Evalue 8.80e-111

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGGCAACGATGGTGAGCAAGCGCTACGACGCGGCGGCGGGCAAGATCGTGCCCGAGCAGCACTACTCGCTCGACGAGGCGATCGGCGTCCTCAAGTCGATGCCGGCCGCGAAGTTCGACGAATCGGTGGATCTCTCGTTCCGCCTCGGCGTCGATCCCAAGCACGCCGACCAGATGGTGCGCGGCGCGGTCGTGCTGCCGCACGGCATCGGCAAGACGGTGCGCGTCGCGGTCTTCGCCAAGGGCGACAAGGACCGCGAGGCCCGCGAGGCCGGCGCCGACACCGTGGGCGCCGAGGACCTCGTCGAGCGCGTGCAGGGCGGCTGGATGGACTTCGACACCGCGATCGCCACGCCCGACCTCATGGGCCAGGTCGGGCGCCTCGGCAAGGTGCTGGGCCCCCGCGGCCTCATGCCGAACCCCAAGCTGGGCACGGTGACGTTCGACGTCTCTCGGGCCGTGCGGGAGGCCAAGGCCGGCAAGATCGAGTTTCGCGTCGACAAGGCGGGCAACGTGCACACGCCGGTGGGCAAGCGGTCGTTCAGCGCGGAGCACCTGCGCGACAACGCGATGGCGCTCATCGAGGCGATCGTGCGGGCCAAGCCGCCCGCCGCCAAGGGCACGTACCTCCGGTCGCTGACGGTGTCAGCCACGATGAGTCCCGGGGTGCCGGTCGACGCCCAGGCGATCGCGAACCTGTTCAAGAAAGCGACGAGCTGA
PROTEIN sequence
Length: 240
MATMVSKRYDAAAGKIVPEQHYSLDEAIGVLKSMPAAKFDESVDLSFRLGVDPKHADQMVRGAVVLPHGIGKTVRVAVFAKGDKDREAREAGADTVGAEDLVERVQGGWMDFDTAIATPDLMGQVGRLGKVLGPRGLMPNPKLGTVTFDVSRAVREAKAGKIEFRVDKAGNVHTPVGKRSFSAEHLRDNAMALIEAIVRAKPPAAKGTYLRSLTVSATMSPGVPVDAQAIANLFKKATS*