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PLM1_30_coex_sep16_scaffold_11278

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_coex_sep16_scaffold_11278_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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230..1204
DNA (975bp) protein (325aa)
methyltransferase bin=bin3_NC10 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_30_coex_sep16_scaffold_11278_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1216..1350
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97265.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
id=1956125 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PLM1_30_coex_sep16_scaffold_11278_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1369..1752
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08571.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Cold-shock DNA-binding domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alkyl hydroperoxide reductase
PLM1_30_coex_sep16_scaffold_11278_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1739..2563
DNA (825bp) protein (275aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_30_coex_sep16_scaffold_11278_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2560..3273)
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JCE7_9GAMM
glycine betaine/choline ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_30_coex_sep16_scaffold_11278_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3270..3953)
DNA (684bp) protein (228aa)
Glycine betaine/L-proline ABC transporter permease and substrate-binding protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2B6_MYXSD bin=16ft_combo_ws3_JS1 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_30_coex_sep16_scaffold_11278_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3957..4154)
DNA (198bp) protein (66aa)
ABC transporter related-protein Tax=Pedosphaera parvula Ellin514 RepID=B9XK63_9BACT
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_30_coex_sep16_scaffold_11278_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4141..4725)
DNA (585bp) protein (195aa)
proline/glycine betaine ABC transporter ATPase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_30_coex_sep16_scaffold_11278_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4722..5780)
DNA (1059bp) protein (353aa)
Oxidoreductase, NAD-binding domain protein Tax=Clostridium sp. MSTE9 RepID=J0WYM5_9CLOT
putative oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_30_coex_sep16_scaffold_11278_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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5912..6970
DNA (1059bp) protein (353aa)
ABC transporter substrate-binding protein Tax=Bradyrhizobium japonicum RepID=UPI00037F187F
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_30_coex_sep16_scaffold_11278_11
unknown

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7182..7244
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 11 items

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