ggKbase home page

PLM1_5_b1_sep16_scaffold_437

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_b1_sep16_scaffold_437_1
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..909
DNA (909bp) protein (303aa)
Putative ribonuclease Tax=Rhodococcus opacus (strain B4) RepID=C1B711_RHOOB
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AEV73826.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
PLM1_5_b1_sep16_scaffold_437_2
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(893..1528)
DNA (636bp) protein (212aa)
membrane protein Tax=Agrococcus pavilionensis RepID=UPI0003909DAC
Uncharacterized protein {ECO:0000313|EMBL:ERG65426.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
PLM1_5_b1_sep16_scaffold_437_3
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1538..2440)
DNA (903bp) protein (301aa)
Calcineurin-like phosphoesterase Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BCR8_SANKS
Calcineurin-like phosphoesterase
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:ACZ20916.1}; species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
PLM1_5_b1_sep16_scaffold_437_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2670..4955)
DNA (2286bp) protein (762aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H3_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_437_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(4955..5944)
DNA (990bp) protein (330aa)
phenylalanyl-tRNA synthetase, subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_437_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5961..6668
DNA (708bp) protein (236aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036F6B46
type 12 methyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_437_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6684..7409)
DNA (726bp) protein (242aa)
tRNA/rRNA methyltransferase (SpoU) Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H5_CONWI
tRNA/rRNA methyltransferase SpoU
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_437_8
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7508..7918
DNA (411bp) protein (137aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI000378CA61
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EFG03587.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
PLM1_5_b1_sep16_scaffold_437_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(7948..8316)
DNA (369bp) protein (123aa)
50S ribosomal protein L20 Tax=Eggerthella sp. CAG:368 RepID=R7BNR2_9ACTN
50S ribosomal protein L20
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_437_10
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8316..8522)
DNA (207bp) protein (69aa)
hypothetical protein Tax=Gracilimonas tropica RepID=UPI00037260B5
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
rpmI; 50S ribosomal protein L35
PLM1_5_b1_sep16_scaffold_437_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8479..8997)
DNA (519bp) protein (173aa)
Translation initiation factor IF-3 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H9_CONWI
translation initiation factor IF-3
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_437_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9081..11066)
DNA (1986bp) protein (662aa)
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonyl-tRNA synthetase (Fragment) Tax=uncultured bacterium RepID=F8UVN5_9BACT
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_437_13
unknown

Not on your lists

comp(11218..11562)
DNA (345bp) protein (115aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_437_14
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11637..12143
DNA (507bp) protein (169aa)
Putative signal-transduction protein containing cAMP-binding and CBS domains Tax=Saccharomonospora glauca K62 RepID=I1CZP1_9PSEU
Putative signal-transduction protein containing cAMP-binding and CBS domains {ECO:0000313|EMBL:EIE98165.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
signal transduction protein
PLM1_5_b1_sep16_scaffold_437_15
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

Not on your lists

comp(12051..12590)
DNA (540bp) protein (180aa)
Uncharacterized protein (Fragment) Tax=Amphimedon queenslandica RepID=I1FET3_AMPQE
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15714594}; species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
Displaying 15 items

View Taxonomy