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PLM1_5_b1_sep16_scaffold_500

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_b1_sep16_scaffold_500_1
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(2..460)
DNA (459bp) protein (153aa)
Porphobilinogen deaminase Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FJM7_DESAA
porphobilinogen deaminase
Tax=RBG_16_Spirochaete_67_19_curated
PLM1_5_b1_sep16_scaffold_500_2
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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comp(572..1798)
DNA (1227bp) protein (409aa)
Glutamyl-tRNA reductase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLS7_THEM7
glutamyl-tRNA reductase
Tax=BJP_08E140C01_Coriobacteriales_62_12
PLM1_5_b1_sep16_scaffold_500_3
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1795..2586)
DNA (792bp) protein (264aa)
Cytochrome C biogenesis protein ResC {ECO:0000313|EMBL:KIH75656.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
cytochrome C biogenesis protein ResC
Cytochrome c-type biogenesis protein CcsB bin=GWF2_Methylomirabilis_70_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PLM1_5_b1_sep16_scaffold_500_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2579..2755)
DNA (177bp) protein (59aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Z6_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_500_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2752..3438)
DNA (687bp) protein (229aa)
Cytochrome c assembly protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Z5_CONWI
cytochrome C assembly protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_500_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3416..4054)
DNA (639bp) protein (213aa)
Heme exporter protein CcmB bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
cytochrome c-type biogenesis protein CcmB
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_500_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4051..4635)
DNA (585bp) protein (195aa)
ccmA; heme exporter protein CcmA; K09687 antibiotic transport system ATP-binding protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ccmA; heme exporter protein CcmA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_500_8
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4849..5289
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Methylomonas methanica (strain MC09) RepID=G0A705_METMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
PLM1_5_b1_sep16_scaffold_500_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5286..6146)
DNA (861bp) protein (287aa)
4-hydroxybenzoate polyprenyltransferase Tax=Thermincola potens (strain JR) RepID=D5X7Q2_THEPJ
4-hydroxybenzoate polyprenyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_500_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6143..6622)
DNA (480bp) protein (160aa)
Molybdenum cofactor synthesis domain protein Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DR71_9BACL
mogA; molybdenum cofactor synthesis domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_500_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6619..7065)
DNA (447bp) protein (149aa)
Cyclic pyranopterin monophosphate synthase accessory protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Z1_CONWI
molybdenum cofactor biosynthesis protein C
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_500_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7079..8497)
DNA (1419bp) protein (473aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000313|EMBL:ABG05882.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ABG05882.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARU6_RUBXD
PLM1_5_b1_sep16_scaffold_500_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8505..9797)
DNA (1293bp) protein (431aa)
Glycosyl transferase group 1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3T3_CONWI
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADB54308.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_5_b1_sep16_scaffold_500_14
Listeria cornellensis, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9852..10298)
DNA (447bp) protein (149aa)
Serine-protein kinase RsbW {ECO:0000313|EMBL:EUJ29661.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EUJ29661.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria cornellensis FSL F6-969.;"
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI0003081BA2
anti-sigma regulatory factor
PLM1_5_b1_sep16_scaffold_500_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10382..11602)
DNA (1221bp) protein (407aa)
Peptidase S1 and S6 chymotrypsin/Hap Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3T2_CONWI
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ADB54307.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 15 items

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