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PLM1_5_b1_sep16_scaffold_581

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_b1_sep16_scaffold_581_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3..119)
DNA (117bp) protein (39aa)
zinc finger UBP-type protein Tax=Patulibacter americanus RepID=UPI0003B40CE9
Zinc finger UBP-type protein {ECO:0000313|EMBL:EHN09286.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
PLM1_5_b1_sep16_scaffold_581_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(116..673)
DNA (558bp) protein (186aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9C1_CONWI
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ADB49088.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_5_b1_sep16_scaffold_581_3
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(676..1632)
DNA (957bp) protein (319aa)
Cyclic nucleotide-binding protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVT5_9CHLR
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ETK35313.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
PLM1_5_b1_sep16_scaffold_581_4
unknown

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comp(1918..2388)
DNA (471bp) protein (157aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_581_5
unknown

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comp(2423..3001)
DNA (579bp) protein (193aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_581_6
Pseudogymnoascus pannorum, Pseudogymnoascus, Leotiomycetes, Ascomycota, Fungi

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3153..3575
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KFZ25440.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus.;" source="Pseudogymnoascus pannorum VKM F-4520 (FW-2644).;"
PLM1_5_b1_sep16_scaffold_581_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3663..4064)
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Nitrobacter sp. Nb-311A RepID=A3X0X3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34115.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
PLM1_5_b1_sep16_scaffold_581_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4118..4936
DNA (819bp) protein (273aa)
hypothetical protein Tax=Burkholderia bryophila RepID=UPI00036308F7
PAS sensor protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM1_5_b1_sep16_scaffold_581_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4958..5359)
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Burkholderia RepID=K0DT86_9BURK
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
PLM1_5_b1_sep16_scaffold_581_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5649..5879)
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SFA7_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB76761.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_5_b1_sep16_scaffold_581_11
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6179..7549)
DNA (1371bp) protein (457aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037C1749
DNA polymerase IV 2
PLM1_5_b1_sep16_scaffold_581_12
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7669..7914
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4YY49_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM63469.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
PLM1_5_b1_sep16_scaffold_581_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7924..8250
DNA (327bp) protein (109aa)
Transcriptional regulator, TraR/DksA family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5W1_CONWI
TraR/DksA family transcriptional regulator
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:ADB52660.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_5_b1_sep16_scaffold_581_14
Chlorobium phaeovibrioides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists


8387..8590
DNA (204bp) protein (68aa)
50S ribosomal protein L31 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=RL31_PROVI
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000255|HAMAP-Rule:MF_00501}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Prosthecochloris vibrioformis (strain DSM 265) (Chlorobium vibrioforme; subsp. thiosulfatophilum (strain DSM 265)) (Chlorobium phaeovibrioides; (strain DSM 265)).;"
PLM1_5_b1_sep16_scaffold_581_15
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8591..8833)
DNA (243bp) protein (81aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
cell division protein FtsH Tax=Frankia sp. Iso899 RepID=UPI0003B5F2A8
ATP-dependent metalloprotease FtsH
PLM1_5_b1_sep16_scaffold_581_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8806..10377)
DNA (1572bp) protein (524aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.6)
ATP-dependent zinc metalloprotease FtsH 3 {ECO:0000255|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_01458};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
cell division protein FtsH Tax=Frankia sp. Iso899 RepID=UPI0003B5F2A8
PLM1_5_b1_sep16_scaffold_581_17
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10508..10810)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VVA1_9ACTO
hypothetical protein
Putative Acyl-CoA N-acyltransferases {ECO:0000313|EMBL:CCH89997.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_5_b1_sep16_scaffold_581_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10975..11745)
DNA (771bp) protein (257aa)
Metallophosphoesterase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDN1_CONWI
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADB49605.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_5_b1_sep16_scaffold_581_19
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11761..12186)
DNA (426bp) protein (142aa)
Polyphosphate glucokinase Tax=Blastopirellula marina DSM 3645 RepID=A3ZY39_9PLAN
Polyphosphate glucokinase {ECO:0000313|EMBL:EAQ78501.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
Polyphosphate glucokinase
Displaying 19 items

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