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PLM1_5_b1_sep16_scaffold_1325

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_b1_sep16_scaffold_1325_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2..1057
DNA (1056bp) protein (352aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Glycine--tRNA ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEI2_CONWI
glycyl-tRNA synthetase
PLM1_5_b1_sep16_scaffold_1325_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1054..1800)
DNA (747bp) protein (249aa)
DNA repair protein RecO Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD10_CONWI
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_5_b1_sep16_scaffold_1325_3
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1868..2122
DNA (255bp) protein (85aa)
Glutaredoxin Tax=Neptuniibacter caesariensis RepID=Q2BHX2_NEPCE
Glutaredoxin {ECO:0000313|EMBL:EAR60033.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
grxC; glutaredoxin
PLM1_5_b1_sep16_scaffold_1325_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2119..2955)
DNA (837bp) protein (279aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
5-hydroxymethyluracil DNA glycosylase Tax=Patulibacter americanus RepID=UPI0003B34F16
PLM1_5_b1_sep16_scaffold_1325_5
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2955..4253)
DNA (1299bp) protein (433aa)
hypothetical protein Tax=Cohnella laeviribosi RepID=UPI0003825ACF
pyrimidine-nucleoside phosphorylase
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:AGA58057.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
PLM1_5_b1_sep16_scaffold_1325_6
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4264..5157)
DNA (894bp) protein (298aa)
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
Phosphopentomutase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CK67_DESK7
PLM1_5_b1_sep16_scaffold_1325_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(5287..6411)
DNA (1125bp) protein (375aa)
ald; alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V931_HALED
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1325_8
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

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comp(6418..6918)
DNA (501bp) protein (167aa)
ADP-ribose pyrophosphatase Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CUZ4_THEYO
NUDIX hydrolase
Tax=RBG_13_Actinobacteria_55_18_curated
PLM1_5_b1_sep16_scaffold_1325_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(6915..7679)
DNA (765bp) protein (255aa)
Aldo/keto reductase Tax=mine drainage metagenome RepID=T1CE66_9ZZZZ
aldo/keto reductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM1_5_b1_sep16_scaffold_1325_10
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(7679..8497)
DNA (819bp) protein (273aa)
Uncharacterized protein Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LUX2_THEPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV11819.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
PLM1_5_b1_sep16_scaffold_1325_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(8484..8822)
DNA (339bp) protein (113aa)
peptidase M20 Tax=Enterovibrio calviensis RepID=UPI0002D64A5C
pepT; peptidase t
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_5_b1_sep16_scaffold_1325_12
unknown

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8896..9684
DNA (789bp) protein (263aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_1325_13
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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comp(9581..11230)
DNA (1650bp) protein (550aa)
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthetase Tax=Bacillus sp. 10403023 RepID=UPI000289326C
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_5_b1_sep16_scaffold_1325_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(11227..12414)
DNA (1188bp) protein (396aa)
Glycosyl transferase family 2 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R862_AMMDK
family 2 glycosyl transferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 14 items

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