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PLM1_5_b1_sep16_scaffold_1411

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_b1_sep16_scaffold_1411_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(46..651)
DNA (606bp) protein (202aa)
Isochorismatase hydrolase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM1_5_b1_sep16_scaffold_1411_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(648..1688)
DNA (1041bp) protein (347aa)
Quinolinate phosphoribosyl transferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y5_CONWI
quinolinate phosphoribosyl transferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1411_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1692..2468)
DNA (777bp) protein (259aa)
Uncharacterized protein Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKV0_CELLD
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1411_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2506..3807)
DNA (1302bp) protein (434aa)
Peptidase M20 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y6_CONWI
peptidase M20
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1411_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3807..4544)
DNA (738bp) protein (246aa)
Tryptophan 2,3-dioxygenase (EC:1.13.11.11)
tryptophan 23-dioxygenase Tax=Streptomyces sp. LaPpAH-202 RepID=UPI00037507D0
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1411_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4556..4906
DNA (351bp) protein (117aa)
AAA ATPase central domain protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH25_RHOMR
AAA ATPase central domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1411_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4903..5754
DNA (852bp) protein (284aa)
Uncharacterized protein Tax=Lachnospiraceae bacterium COE1 RepID=R9KKJ5_9FIRM
recombination factor protein RarA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1411_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5751..6422)
DNA (672bp) protein (224aa)
Metallophosphoesterase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDN1_CONWI
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADB49605.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_5_b1_sep16_scaffold_1411_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6443..7222
DNA (780bp) protein (260aa)
Alpha/beta hydrolase fold protein Tax=Frankia sp. CN3 RepID=G6H9Y2_9ACTO
alpha/beta hydrolase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1411_10
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7224..8102)
DNA (879bp) protein (293aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
Arginase Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS85_KYRT2
arginase
PLM1_5_b1_sep16_scaffold_1411_11
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8162..8554
DNA (393bp) protein (131aa)
Nitrate/nitrite response regulator NarL Tax=Pseudogulbenkiania RepID=G2J1T8_PSEUL
narL; nitrate/nitrite response regulator NarL
Nitrate/nitrite response regulator NarL {ECO:0000313|EMBL:BAK76266.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
PLM1_5_b1_sep16_scaffold_1411_trna_1
unknown

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8605..8677
DNA (73bp)
transferRNA Phe
PLM1_5_b1_sep16_scaffold_1411_12
unknown

Not on your lists

comp(8768..8911)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_1411_13
unknown

Not on your lists

9139..9708
DNA (570bp) protein (190aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_1411_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10110..10922)
DNA (813bp) protein (271aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003820FA4
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1411_15
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10898..11545)
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Agrococcus pavilionensis RW1 RepID=U1LAY2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ERG64238.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
uroporphyrinogen III synthase HEM4
PLM1_5_b1_sep16_scaffold_1411_16
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11547..11822)
DNA (276bp) protein (92aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
Porphobilinogen deaminase bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Displaying 17 items

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