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PLM1_5_b1_sep16_scaffold_1895

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_b1_sep16_scaffold_1895_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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2..238
DNA (237bp) protein (79aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_5_b1_sep16_scaffold_1895_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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423..1517
DNA (1095bp) protein (365aa)
RNA polymerase sigma factor SigA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFH8_CONWI
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_5_b1_sep16_scaffold_1895_3
unknown

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comp(1522..3495)
DNA (1974bp) protein (658aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_1895_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3828..4400)
DNA (573bp) protein (191aa)
NADH dehydrogenase (h(2)o(2)-forming nadh oxidase)(nadh:oxygen oxidoreductase) (EC:1.6.99.3)
nitroreductase Tax=Patulibacter americanus RepID=UPI0003B33C71
Nitroreductase family protein {ECO:0000313|EMBL:EHN11909.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
PLM1_5_b1_sep16_scaffold_1895_5
unknown

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comp(4351..4590)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_1895_6

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comp(4636..5148)
DNA (513bp) protein (171aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T1A1Y9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD50913.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM1_5_b1_sep16_scaffold_1895_7
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5155..5604)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Streptomyces afghaniensis 772 RepID=S4MFN1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPJ34295.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
hypothetical protein
PLM1_5_b1_sep16_scaffold_1895_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5894..6553
DNA (660bp) protein (220aa)
peroxidase (EC:1.11.1.7)
Peroxidase Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EQ80_METSB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM1_5_b1_sep16_scaffold_1895_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6764..7078
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4ECB0_9CHLR
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1895_10
unknown

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7145..7300
DNA (156bp) protein (52aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_1895_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7297..8229)
DNA (933bp) protein (311aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000360A2E7
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 11 items

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