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PLM1_5_b1_sep16_scaffold_5485_3

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 720..1490

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Collinsella sp. CAG:289 RepID=R7D383_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 245.0
  • Bit_score: 257
  • Evalue 1.10e-65
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 244.0
  • Bit_score: 256
  • Evalue 4.20e-66
Tax=RBG_13_Actinobacteria_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 253.0
  • Bit_score: 307
  • Evalue 1.30e-80

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Taxonomy

RBG_13_Actinobacteria_63_9_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 771
GTGAGCGAAGCCGACAAGGCCCTGCTCCGCCGCTACCACGAGGACGGTGACTTGCAGGCGCGCGAGCAGCTGATCGAGCAGTACATGTCGCTCGTGCGTTCGCTCGCGCGGCGGTACTCGTATCGCGGCGAGCAGCTCGAAGACCTCGTCCAGATCGGCGCGATCGGACTGATCAAGGCGATCGATCGCTTCGACATCGACCGTGGCGTCGAGCTGACCACCTATGCGACGCCAAACATCATCGGGGAGATCAAGCGCCATTTCCGCGACAAGGGCTGGTCCGTCCGCGTCCCGCGCGGGCTCCAGGAGCTCAACGTGCAACTGTCCAAGCTCGTGGAGCAGCTGACGGTGCAACTCGGCCGCTCGCCGACGATCGCCGAGCTCGCCAAGGGGGCAGGGGTGGAAGAGGAAGAGGTTCTCGAGGCGCTTGAGTCCGGTCGAGCCTACTCGTCGCTGTCGCTCTCTTCGGGCGGCGGCGGAAGCGACGACGGGGAGGAGCTCGATCCGCTCGAGTCGATCGGCACCGAGGAGCATCAATACGACGTGTCGGAGGACCGAGCCGTGCTCGCACCCGGGTTCCGCGTGCTCGACGAACGGGAACGCAAGATCCTCCACCTTCGCTTCTTCGAGGGATTGACGCAGTCTCAGATCGCCCAGCAGGTCGGCATCTCGCAGATGCACGTGTCGCGGCTGATCCGGCGCTCGCTCGAGAAGATCCGCGAGGAGATCGCCGCCGAGGAAAGCAGCGAGCCGAAAGTCGCTAGAGGTTAA
PROTEIN sequence
Length: 257
VSEADKALLRRYHEDGDLQAREQLIEQYMSLVRSLARRYSYRGEQLEDLVQIGAIGLIKAIDRFDIDRGVELTTYATPNIIGEIKRHFRDKGWSVRVPRGLQELNVQLSKLVEQLTVQLGRSPTIAELAKGAGVEEEEVLEALESGRAYSSLSLSSGGGGSDDGEELDPLESIGTEEHQYDVSEDRAVLAPGFRVLDERERKILHLRFFEGLTQSQIAQQVGISQMHVSRLIRRSLEKIREEIAAEESSEPKVARG*