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PLM1_5_b1_sep16_scaffold_5485

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_b1_sep16_scaffold_5485_1
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..235
DNA (234bp) protein (78aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
tRNA-specific 2-thiouridylase MnmA Tax=Thermincola potens (strain JR) RepID=D5X840_THEPJ
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
PLM1_5_b1_sep16_scaffold_5485_2
unknown

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334..723
DNA (390bp) protein (130aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_5485_3
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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720..1490
DNA (771bp) protein (257aa)
RNA polymerase sigma factor Tax=Collinsella sp. CAG:289 RepID=R7D383_9ACTN
sigma-B/F/G subfamily RNA polymerase sigma-28 factor
Tax=RBG_13_Actinobacteria_63_9_curated
PLM1_5_b1_sep16_scaffold_5485_4
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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1648..2946
DNA (1299bp) protein (433aa)
Alanine--tRNA ligase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K228_DEHLB
alanyl-tRNA synthetase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_5_b1_sep16_scaffold_5485_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2906..3640
DNA (735bp) protein (245aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Alanine--tRNA ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCU1_CONWI
Suspect SCG annotation. See neighboring gene [PLM1_5_b1_sep16_scaffold_5485_4].
Displaying 5 items

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