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PLM1_5_coex_redo_sep16_scaffold_191

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_coex_redo_sep16_scaffold_191_1
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..586)
DNA (585bp) protein (195aa)
sugar ABC transporter substrate-binding protein Tax=Streptomyces canus RepID=UPI00036113A3
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EIF93594.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
solute binding protein
PLM1_5_coex_redo_sep16_scaffold_191_2
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(659..1618)
DNA (960bp) protein (320aa)
Putative ABC transporter permease protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H0B5_ACTM4
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAL86452.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_5_coex_redo_sep16_scaffold_191_3
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1623..3140)
DNA (1518bp) protein (506aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EFG10193.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EFG10193.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
sugar ABC transporter ATPase Tax=Streptomyces sulphureus RepID=UPI000364727E
rbsA3; ABC transporter, ATP binding subunit (putative high-affinity D-ribose transport)
PLM1_5_coex_redo_sep16_scaffold_191_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3547..4350)
DNA (804bp) protein (268aa)
RNA polymerase sigma factor Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XDP4_MICPN
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:BAK35067.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_191_5
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4563..4994)
DNA (432bp) protein (144aa)
Regulatory protein, MarR Tax=Dehalobacter RepID=K4L039_9FIRM
TrmB family transcriptional regulator
TrmB family transcriptional regulator {ECO:0000313|EMBL:AHF10989.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
PLM1_5_coex_redo_sep16_scaffold_191_6
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5038..5598
DNA (561bp) protein (187aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00037FBC43
Uncharacterized protein {ECO:0000313|EMBL:KKC39228.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
PLM1_5_coex_redo_sep16_scaffold_191_7
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5604..6047
DNA (444bp) protein (148aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00038035EA
RNA polymerase sigma24 factor {ECO:0000313|EMBL:GAM50054.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
ECF subfamily RNA polymerase sigma-24 factor
PLM1_5_coex_redo_sep16_scaffold_191_8
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6131..7489
DNA (1359bp) protein (453aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000365EB54
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADP84594.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_5_coex_redo_sep16_scaffold_191_9
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7491..9590)
DNA (2100bp) protein (700aa)
Translation elongation factor EF-G Tax=Janibacter sp. HTCC2649 RepID=A3TP61_9MICO
Elongation factor G {ECO:0000313|EMBL:KGN35944.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
translation elongation factor 2 (EF-2/EF-G)
PLM1_5_coex_redo_sep16_scaffold_191_10
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9715..11550
DNA (1836bp) protein (612aa)
hypothetical protein Tax=Microbacterium sp. 292MF RepID=UPI0003672729
ABC transporter {ECO:0000313|EMBL:KGM15058.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
ABC transporter permease/ATP-binding protein
PLM1_5_coex_redo_sep16_scaffold_191_11
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11624..12091
DNA (468bp) protein (156aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037BABC6
Membrane protein {ECO:0000313|EMBL:EOD65774.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
membrane protein
PLM1_5_coex_redo_sep16_scaffold_191_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12112..13755
DNA (1644bp) protein (548aa)
signal peptidase Tax=Frankia sp. Iso899 RepID=UPI0003B348D5
signal peptide peptidase SppA, 36K type
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:ACV78784.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_5_coex_redo_sep16_scaffold_191_13
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13859..14821)
DNA (963bp) protein (321aa)
HTH type 11 transcriptional regulator Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G6J9_9PSEU
HTH type 11 transcriptional regulator {ECO:0000313|EMBL:EOD67048.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
HTH type 11 transcriptional regulator
PLM1_5_coex_redo_sep16_scaffold_191_14
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14886..16052
DNA (1167bp) protein (389aa)
hydrolase Tax=Promicromonospora sukumoe RepID=UPI0003661D97
epocide hydrolase domain-containing protein
Epocide hydrolase domain-containing protein {ECO:0000313|EMBL:AEK42871.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_5_coex_redo_sep16_scaffold_191_15
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16082..17140)
DNA (1059bp) protein (353aa)
DNA repair photolyase Tax=Saccharomonospora marina XMU15 RepID=H5XBN3_9PSEU
Radical SAM superfamily protein {ECO:0000313|EMBL:EUA12100.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
hypothetical protein
PLM1_5_coex_redo_sep16_scaffold_191_16
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17353..18435
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTY3_SIDLE
phosphoserine aminotransferase
Tax=GWA2_Rhodocyclales_65_20_curated
PLM1_5_coex_redo_sep16_scaffold_191_17
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18444..19628
DNA (1185bp) protein (395aa)
Phosphoglycerate dehydrogenase-like oxidoreductase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI35_9BURK
phosphoglycerate dehydrogenase-like oxidoreductase
Tax=GWA2_Rhodocyclales_65_20_curated
PLM1_5_coex_redo_sep16_scaffold_191_18
unknown

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19691..19864
DNA (174bp) protein (58aa)

This feature has no annotations

PLM1_5_coex_redo_sep16_scaffold_191_19
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19836..20231)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI000373363C
hypothetical protein
Tax=RBG_16_Actinobacteria_68_21_curated
PLM1_5_coex_redo_sep16_scaffold_191_20
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20359..20520)
DNA (162bp) protein (54aa)
Short-chain dehydrogenase/reductase SDR Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C1E2_BEUC1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACQ81552.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Displaying 20 items

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