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PLM1_5_coex_redo_sep16_scaffold_314

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_coex_redo_sep16_scaffold_314_1
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..197
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:CCQ46559.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
PLM1_5_coex_redo_sep16_scaffold_314_trna_1
unknown

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comp(83..155)
DNA (73bp)
transferRNA Gly
PLM1_5_coex_redo_sep16_scaffold_314_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

296..1156
DNA (861bp) protein (287aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:BAK35354.1}; EC=2.6.1.- {ECO:0000313|EMBL:BAK35354.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Aminotransferase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XFE7_MICPN
PLM1_5_coex_redo_sep16_scaffold_314_3
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1195..1548)
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XQ56_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK36887.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_314_4
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1940..2314)
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4F558_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH90771.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_5_coex_redo_sep16_scaffold_314_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2474..2797)
DNA (324bp) protein (108aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI0003603A0C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44519.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_5_coex_redo_sep16_scaffold_314_6
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2836..4023)
DNA (1188bp) protein (396aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI00037599D5
MFS transporter {ECO:0000313|EMBL:KKD04603.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
MFS transporter
PLM1_5_coex_redo_sep16_scaffold_314_7
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4072..5469
DNA (1398bp) protein (466aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI0003606C7F
GntR family transcriptional regulator {ECO:0000313|EMBL:KKD04604.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
GntR family transcriptional regulator
PLM1_5_coex_redo_sep16_scaffold_314_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(5470..5943)
DNA (474bp) protein (158aa)
Globin Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7J6_9CHLR
Globin {ECO:0000313|EMBL:EFH79857.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
globin
PLM1_5_coex_redo_sep16_scaffold_314_9
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5985..6446)
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M577_ARTPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX74597.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
PLM1_5_coex_redo_sep16_scaffold_314_10
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7319..8128)
DNA (810bp) protein (270aa)
Putative lyase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XSA4_MICPN
lyase
Putative lyase {ECO:0000313|EMBL:BAK34785.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_314_11
unknown

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8342..8551
DNA (210bp) protein (70aa)

This feature has no annotations

PLM1_5_coex_redo_sep16_scaffold_314_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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8798..10087
DNA (1290bp) protein (430aa)
Uncharacterized protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X861_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77037.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_5_coex_redo_sep16_scaffold_314_13
unknown

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10108..10275
DNA (168bp) protein (56aa)

This feature has no annotations

PLM1_5_coex_redo_sep16_scaffold_314_14
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10254..10931
DNA (678bp) protein (226aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003719323
Transposase {ECO:0000313|EMBL:CCH69349.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
transposase
PLM1_5_coex_redo_sep16_scaffold_314_15
unknown

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11015..11221
DNA (207bp) protein (69aa)

This feature has no annotations

PLM1_5_coex_redo_sep16_scaffold_314_16
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11262..11729
DNA (468bp) protein (156aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381FE2D
globin
Globin {ECO:0000313|EMBL:ADP79421.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_5_coex_redo_sep16_scaffold_314_17
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11782..12501)
DNA (720bp) protein (240aa)
aminoglycoside phosphotransferase Tax=Micromonospora sp. CNB394 RepID=UPI0003604D67
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ADL48191.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_5_coex_redo_sep16_scaffold_314_18
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12864..13232
DNA (369bp) protein (123aa)
Transcriptional regulator, ArsR family Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BWF0_BEUC1
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACQ78608.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM1_5_coex_redo_sep16_scaffold_314_19
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13229..13756
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6R273_NOCCG
Uncharacterized protein {ECO:0000313|EMBL:EWC63276.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
PLM1_5_coex_redo_sep16_scaffold_314_20
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13880..14479
DNA (600bp) protein (200aa)
Dihydrofolate reductase {ECO:0000313|EMBL:CEL17941.1}; EC=1.5.1.3 {ECO:0000313|EMBL:CEL17941.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein Tax=Streptomyces RepID=UPI000375910C
deaminase-reductase domain-containing protein
PLM1_5_coex_redo_sep16_scaffold_314_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14799..15365)
DNA (567bp) protein (189aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Peptide methionine sulfoxide reductase MsrA Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRX6_PSEUX
PLM1_5_coex_redo_sep16_scaffold_314_22
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15876..16250
DNA (375bp) protein (125aa)
Putative transcriptional regulator Tax=Patulibacter medicamentivorans RepID=H0E825_9ACTN
Putative transcriptional regulator {ECO:0000313|EMBL:EHN10223.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
LuxR family transcriptional regulator
Displaying 23 items

View Taxonomy