ggKbase home page

PLM1_5_coex_redo_sep16_scaffold_336

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_coex_redo_sep16_scaffold_336_1
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1353)
DNA (1353bp) protein (451aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJB3_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33439.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_336_2
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1615..2838
DNA (1224bp) protein (408aa)
Beta-lactamase, class C Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K2V2_SACES
beta-lactamase, class C
Beta-lactamase, class C {ECO:0000313|EMBL:CCH30903.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_5_coex_redo_sep16_scaffold_336_3
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2889..3995)
DNA (1107bp) protein (369aa)
Oxidoreductase Tax=Amycolatopsis mediterranei RepID=G0FML4_AMYMS
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AEK43159.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_5_coex_redo_sep16_scaffold_336_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4000..5580)
DNA (1581bp) protein (527aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XHS8_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33223.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_336_5
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5726..6358)
DNA (633bp) protein (211aa)
Transcriptional regulator Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X8M9_STRVR
Transcriptional regulator {ECO:0000313|EMBL:EFL36283.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
XRE family transcriptional regulator
PLM1_5_coex_redo_sep16_scaffold_336_6
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6574..7938
DNA (1365bp) protein (455aa)
Peptidase M24 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTQ6_ACIC1
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:ABK52816.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_5_coex_redo_sep16_scaffold_336_7
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7935..8942
DNA (1008bp) protein (336aa)
pyruvate dehydrogenase (EC:1.2.4.1)
Uncharacterized protein Tax=Streptomyces sp. HGB0020 RepID=S2YRF6_9ACTO
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha {ECO:0000313|EMBL:KKD08832.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
PLM1_5_coex_redo_sep16_scaffold_336_8
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8930..9910
DNA (981bp) protein (327aa)
Putative Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta Tax=Streptomyces afghaniensis 772 RepID=S4MRK3_9ACTO
Acetoin dehydrogenase {ECO:0000313|EMBL:KDN72570.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
acetoin dehydrogenase E1 component subunit beta
PLM1_5_coex_redo_sep16_scaffold_336_9
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9955..11301
DNA (1347bp) protein (449aa)
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase Tax=Streptomyces afghaniensis 772 RepID=S4N3E5_9ACTO
Amidohydrolase {ECO:0000313|EMBL:KKD08791.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
hypothetical protein
PLM1_5_coex_redo_sep16_scaffold_336_10
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11298..12191
DNA (894bp) protein (298aa)
Uncharacterized protein Tax=Streptomyces sp. HGB0020 RepID=S2YRF0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD67008.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
cupin
PLM1_5_coex_redo_sep16_scaffold_336_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12188..12880
DNA (693bp) protein (231aa)
Short-chain dehydrogenase/reductase SDR bin=GWF2_Methylomirabilis_70_14 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_5_coex_redo_sep16_scaffold_336_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12877..13749
DNA (873bp) protein (291aa)
6-phosphogluconate dehydrogenase, NAD-binding protein bin=GWF2_Methylomirabilis_70_14 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
6-phosphogluconate dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_5_coex_redo_sep16_scaffold_336_13
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13788..14066)
DNA (279bp) protein (93aa)
Hypothetical membrane protein Tax=Rhodococcus opacus (strain B4) RepID=C1AZX6_RHOOB
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH54397.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
PLM1_5_coex_redo_sep16_scaffold_336_14
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14223..15656)
DNA (1434bp) protein (478aa)
adenylate cyclase Tax=Rhodococcus sp. DK17 RepID=UPI00037A4092
Uncharacterized protein {ECO:0000313|EMBL:ELB94239.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
Adenylate cyclase
Displaying 14 items

View Taxonomy