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PLM1_5_coex_redo_sep16_scaffold_686

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_coex_redo_sep16_scaffold_686_1
Bos mutus, Bos, Mammalia, Chordata, Metazoa

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2..817
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Streptomyces arginensis RepID=M1T9P7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ELR45452.1}; Flags: Fragment;; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos.;" source="Bos mutus.;"
cell wall surface anchor family protein
PLM1_5_coex_redo_sep16_scaffold_686_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1145..2152)
DNA (1008bp) protein (336aa)
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Homoserine kinase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XKH7_MICPN
PLM1_5_coex_redo_sep16_scaffold_686_3
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2191..3300)
DNA (1110bp) protein (370aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Threonine synthase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XKH8_MICPN
PLM1_5_coex_redo_sep16_scaffold_686_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3302..4648)
DNA (1347bp) protein (449aa)
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Homoserine dehydrogenase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XKH9_MICPN
PLM1_5_coex_redo_sep16_scaffold_686_5
unknown

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comp(4752..4943)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM1_5_coex_redo_sep16_scaffold_686_6
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4940..6340)
DNA (1401bp) protein (467aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Diaminopimelate decarboxylase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XKI0_MICPN
PLM1_5_coex_redo_sep16_scaffold_686_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6410..7078)
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q3G3_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB34086.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_5_coex_redo_sep16_scaffold_686_trna_1
unknown

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7052..7123
DNA (72bp)
transferRNA Arg
PLM1_5_coex_redo_sep16_scaffold_686_8
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7302..7970
DNA (669bp) protein (223aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI00035F9A64
IS110 family transposase
Putative IS110 family IS1547-like transposase {ECO:0000313|EMBL:BAC68012.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM1_5_coex_redo_sep16_scaffold_686_9
unknown

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comp(7983..8315)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM1_5_coex_redo_sep16_scaffold_686_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8414..9598)
DNA (1185bp) protein (395aa)
Amidohydrolase Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EPX2_STRRM
Uncharacterized protein {ECO:0000313|EMBL:ETK32874.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
amidohydrolase
PLM1_5_coex_redo_sep16_scaffold_686_11
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10325..10615)
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZGG8_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS90979.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
PLM1_5_coex_redo_sep16_scaffold_686_12
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10852..11031)
DNA (180bp) protein (60aa)
Integrase catalytic region (Modular protein) Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RU92_BLASD
Uncharacterized protein {ECO:0000313|EMBL:KFF57889.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
integrase catalytic region (modular protein)
PLM1_5_coex_redo_sep16_scaffold_686_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(11129..11545)
DNA (417bp) protein (139aa)
Putative uncharacterized protein Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1TB72_MYCVP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY17488.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Displaying 14 items

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