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PLM1_5_coex_redo_sep16_scaffold_0_23

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 29979..30851

Top 3 Functional Annotations

Value Algorithm Source
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 289.0
  • Bit_score: 364
  • Evalue 9.70e-98
RNA polymerase sigma factor {ECO:0000313|EMBL:EJJ08436.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 294.0
  • Bit_score: 347
  • Evalue 1.00e-92
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 283.0
  • Bit_score: 345
  • Evalue 1.30e-92

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Taxonomy

Streptomyces auratus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGGCTCAAGACGATTGGCTGGCGGACCGATTCGAGCAGCACCGCAGTCATCTGCGGGCCGTGGCCTACCGGATGCTCGGATCGGCGAGTGACGCCGACGACGCGGTCCAGGAGGCGTGGATCAGGCTCAGCCGGTCTGACAGCAGTGCCGTTGAGAACCTCGGCGGCTGGCTCACCACTGTGGTGGCTCGGGTCGCACTGGACATGTTGCGTTCGCGTACGTCGCGGCGCGAAGAACCAGTTGGCGAGGTGCCGCCACCGCCCGCTGATACCGGCACATTCGGAGCTGAGCCCGAGCGTGCCGCCGAGCTCGCTGACTCCCTAGGACCAGCCATGCTCGTGGTGCTGGAGACGTTGTCACCAGCCGAGCGGATCGCCTTTGTGCTGCATGACATGTTCGCCGTTCCGTTCGATGAGATCGCCCCGATCGTCGGGCGTTCACCAGCTGCGGCGCGACAGCTGGCGAGCCGCGCTCGCCGCCGCGTCCAGGGAGTCGCTGTCGCTCCCGACGATCGCGGCCGTGCCCGGCGAATCGTCGAGGCTTTCCTGGCCGCGTCCCGCAATGGAGATTTCGGAGCATTGCTTGCGCTGCTCGATCCGGACGTCGTGCTGTCCGCAGACGCCGATGCCGTGCGGGTGGGCGCGTCGGATCTGGTAGGCGGCGCCAAGGCCGTCGCCGAGTCGTTCTCGGGACGAGCCCGAGCTGCGCAACTGGCCTTGATCGATGGGCAACCCGGAGCTGTCTGGGCGCCTGGCGGAAAGCCTCGGGTCGTCTTCAGCTTCACAGTCCATGACGACAAGATCACCGCGATCCAGTTGCTGGCTGACGCGACTCGACTTGGTGAGCTGGACCTTGTGTTGTTGGGCGACTGA
PROTEIN sequence
Length: 291
MAQDDWLADRFEQHRSHLRAVAYRMLGSASDADDAVQEAWIRLSRSDSSAVENLGGWLTTVVARVALDMLRSRTSRREEPVGEVPPPPADTGTFGAEPERAAELADSLGPAMLVVLETLSPAERIAFVLHDMFAVPFDEIAPIVGRSPAAARQLASRARRRVQGVAVAPDDRGRARRIVEAFLAASRNGDFGALLALLDPDVVLSADADAVRVGASDLVGGAKAVAESFSGRARAAQLALIDGQPGAVWAPGGKPRVVFSFTVHDDKITAIQLLADATRLGELDLVLLGD*