ggKbase home page

PLM1_5_coex_redo_sep16_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_coex_redo_sep16_scaffold_0_1
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..206
DNA (204bp) protein (68aa)
alpha-mannosidase Tax=Streptomyces sp. Amel2xE9 RepID=UPI000378C722
alpha-mannosidase
Putative Alpha-mannosidase {ECO:0000313|EMBL:ELS58327.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
PLM1_5_coex_redo_sep16_scaffold_0_2
unknown

Not on your lists

411..1376
DNA (966bp) protein (322aa)

This feature has no annotations

PLM1_5_coex_redo_sep16_scaffold_0_3
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1713..4850)
DNA (3138bp) protein (1046aa)
monophenol monooxygenase (EC:1.14.18.1)
Monophenol monooxygenase Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UDJ1_CELFN
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM1_5_coex_redo_sep16_scaffold_0_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5058..5471
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK66_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33562.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_0_5
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5584..6225
DNA (642bp) protein (214aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK64_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33560.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_0_6
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6300..6791
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK63_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33559.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_0_7
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6788..9145
DNA (2358bp) protein (786aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK62_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33558.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_0_8
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9275..10066
DNA (792bp) protein (264aa)
ppgK; polyphosphate-dependent glucokinase (EC:2.7.1.63)
Polyphosphate-dependent glucokinase {ECO:0000313|EMBL:BAK33557.1}; EC=2.7.1.63 {ECO:0000313|EMBL:BAK33557.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Polyphosphate-dependent glucokinase Tax=Microlunatus phosphovorus RepID=F5XK61_MICPN
PLM1_5_coex_redo_sep16_scaffold_0_9
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10281..11918)
DNA (1638bp) protein (546aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Arginine--tRNA ligase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK60_MICPN
PLM1_5_coex_redo_sep16_scaffold_0_10
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11991..12779)
DNA (789bp) protein (263aa)
DNA glycosylase (EC:3.2.2.-)
Putative DNA glycosylase {ECO:0000313|EMBL:BAK33552.1}; EC=3.2.2.- {ECO:0000313|EMBL:BAK33552.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Putative DNA glycosylase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK56_MICPN
PLM1_5_coex_redo_sep16_scaffold_0_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12978..13832)
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK55_MICPN
3-methyl-adenine DNA glycosylase II {ECO:0000313|EMBL:KJL19455.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
PLM1_5_coex_redo_sep16_scaffold_0_12
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13965..14612
DNA (648bp) protein (216aa)
Uncharacterized membrane protein Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BKD4_SANKS
hypothetical protein
Uncharacterized membrane protein {ECO:0000313|EMBL:ACZ20411.1}; species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
PLM1_5_coex_redo_sep16_scaffold_0_13
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

15087..18401
DNA (3315bp) protein (1105aa)
Acriflavin resistance protein bin=GWC2_Chloroflexi_73_18 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
acriflavin resistance protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_5_coex_redo_sep16_scaffold_0_14
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18401..18862
DNA (462bp) protein (154aa)
hypothetical protein Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000366C7DF
Uncharacterized protein {ECO:0000313|EMBL:KGN30666.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
PLM1_5_coex_redo_sep16_scaffold_0_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

18876..22016
DNA (3141bp) protein (1047aa)
Acriflavin resistance protein bin=GWC2_Chloroflexi_73_18 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
acriflavin resistance protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_5_coex_redo_sep16_scaffold_0_16
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22078..23751)
DNA (1674bp) protein (558aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK26_MICPN
PLM1_5_coex_redo_sep16_scaffold_0_17
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23868..25385
DNA (1518bp) protein (506aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK25_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33521.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_0_18
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25572..26192
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK23_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33519.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_0_19
unknown

Not on your lists

comp(26244..26390)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM1_5_coex_redo_sep16_scaffold_0_20
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26668..27129)
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK22_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33518.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_0_21
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27241..28146)
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK13_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33509.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_0_22
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28473..29828
DNA (1356bp) protein (452aa)
Oxidoreductase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK12_MICPN
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:BAK33508.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_0_23
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29979..30851
DNA (873bp) protein (291aa)
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
RNA polymerase sigma factor {ECO:0000313|EMBL:EJJ08436.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM1_5_coex_redo_sep16_scaffold_0_24
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30942..31565)
DNA (624bp) protein (208aa)
3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Putative 3-methyladenine DNA glycosylase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK11_MICPN
PLM1_5_coex_redo_sep16_scaffold_0_25
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31562..34105)
DNA (2544bp) protein (848aa)
Phosphoenolpyruvate synthase family protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK10_MICPN
phosphoenolpyruvate synthase
Phosphoenolpyruvate synthase family protein {ECO:0000313|EMBL:BAK33506.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_0_26
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34131..35264)
DNA (1134bp) protein (378aa)
Putative oxidoreductase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK09_MICPN
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK33505.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_5_coex_redo_sep16_scaffold_0_27
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35506..36159
DNA (654bp) protein (218aa)
Two-component system, response regulator of the winged helix family Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JR74_SACES
DNA-binding response regulator PrrA {ECO:0000313|EMBL:EWM13856.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
Two-component system, response regulator of the winged helix family
PLM1_5_coex_redo_sep16_scaffold_0_28
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36156..37523
DNA (1368bp) protein (456aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
Two-component system histidine kinase Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IHK0_9PSEU
two-component system histidine kinase
PLM1_5_coex_redo_sep16_scaffold_0_29
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37534..39993)
DNA (2460bp) protein (820aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI000368B7A0
Glycosyl hydrolase {ECO:0000313|EMBL:KJK52103.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
glycosyl hydrolase family protein
PLM1_5_coex_redo_sep16_scaffold_0_30
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40136..40456)
DNA (321bp) protein (107aa)
hypothetical protein Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B52FE6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC66959.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
Displaying items 1-30 of 198 in total

View Taxonomy