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PLM1_60_b1_redo_sep16_scaffold_1030

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1030_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2..748
DNA (747bp) protein (249aa)
2-alkenal reductase Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SJM3_PLABD
putative NADP-dependent oxidoreductase
Putative NADP-dependent oxidoreductase {ECO:0000313|EMBL:AIF82110.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1030_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(991..1923)
DNA (933bp) protein (311aa)
serA; 2-hydroxyacid dehydrogenase (EC:1.1.1.95)
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:AFU59597.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AFU59597.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
2-hydroxyacid dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP9_NITGG
PLM1_60_b1_redo_sep16_scaffold_1030_3
unknown

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comp(2507..2659)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1030_4
unknown

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comp(3146..3340)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1030_5
unknown

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comp(3397..3786)
DNA (390bp) protein (130aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1030_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3874..5262)
DNA (1389bp) protein (463aa)
fumC; fumarate hydratase (EC:4.3.1.1)
Putative fumarate hydratase {ECO:0000313|EMBL:AFU59599.1}; EC=4.3.1.1 {ECO:0000313|EMBL:AFU59599.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative fumarate hydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INL8_NITGG
PLM1_60_b1_redo_sep16_scaffold_1030_7
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5380..5799)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KN21_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG41254.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
secondary thiamine-phosphate synthase enzyme
PLM1_60_b1_redo_sep16_scaffold_1030_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5896..7509
DNA (1614bp) protein (538aa)
Putative streptogramin lyase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN59_NITGG
putative streptogramin lyase
Putative streptogramin lyase {ECO:0000313|EMBL:AIC14524.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_1030_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7511..8698)
DNA (1188bp) protein (396aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoglycerate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKB7_NITGG
PLM1_60_b1_redo_sep16_scaffold_1030_10
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8801..9187)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJN5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84059.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1030_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9589..10104)
DNA (516bp) protein (172aa)
50S ribosomal protein L10e Tax=Candidatus Nitrososphaera gargensis RepID=K0IIF7_NITGG
ribosomal protein L16/L10E
Ribosomal protein L16/L10E {ECO:0000313|EMBL:AIF83741.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1030_12
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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10160..10756
DNA (597bp) protein (199aa)
endA1; putative tRNA-splicing endonuclease (EC:4.6.1.16)
tRNA intron endonuclease Tax=uncultured crenarchaeote 76h13 RepID=D4N791_9CREN
tRNA intron endonuclease {ECO:0000313|EMBL:ACY24577.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
PLM1_60_b1_redo_sep16_scaffold_1030_trna_1
unknown

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comp(11145..11220)
DNA (76bp)
transferRNA Glu
PLM1_60_b1_redo_sep16_scaffold_1030_13
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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11472..12545
DNA (1074bp) protein (358aa)
Radical SAM domain-containing protein Tax=uncultured crenarchaeote 76h13 RepID=D4N789_9CREN
Radical SAM domain-containing protein {ECO:0000313|EMBL:ACY24575.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
radical SAM domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1030_14
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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12782..13663
DNA (882bp) protein (294aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase Tax=uncultured crenarchaeote 76h13 RepID=D4N788_9CREN
carbohydrate kinase
PLM1_60_b1_redo_sep16_scaffold_1030_15
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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13742..14695
DNA (954bp) protein (318aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 76h13 RepID=D4N787_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24573.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1030_16
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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comp(14766..15953)
DNA (1188bp) protein (396aa)
Sodium/hydrogen exchanger Tax=uncultured crenarchaeote 76h13 RepID=D4N786_9CREN
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ACY24572.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
monovalent cation/proton antiporter-2 family protein
PLM1_60_b1_redo_sep16_scaffold_1030_17
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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comp(16032..16187)
DNA (156bp) protein (52aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote 76h13 RepID=D4N785_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:ACY24571.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1030_18
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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comp(16270..16449)
DNA (180bp) protein (60aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote 76h13 RepID=D4N784_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:ACY24570.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
PLM1_60_b1_redo_sep16_scaffold_1030_19
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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16657..17220
DNA (564bp) protein (188aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote 76h13 RepID=D4N783_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:ACY24569.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1030_20
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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17289..18002
DNA (714bp) protein (238aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 76h13 RepID=D4N782_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24568.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1030_21
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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comp(18137..19468)
DNA (1332bp) protein (444aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 76h13 RepID=D4N781_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24567.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1030_22
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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19594..19818
DNA (225bp) protein (75aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 76h13 RepID=D4N779_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24565.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
PLM1_60_b1_redo_sep16_scaffold_1030_23
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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19897..20661
DNA (765bp) protein (255aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 76h13 RepID=D4N778_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24564.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
PLM1_60_b1_redo_sep16_scaffold_1030_24
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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20917..21168
DNA (252bp) protein (84aa)
nirK; putative copper-containing nitrite reductase (EC:1.7.2.1)
Copper-containing nitrite reductase Tax=environmental samples RepID=D4N705_9CREN
Copper-containing nitrite reductase {ECO:0000313|EMBL:ACY24491.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
Displaying 25 items

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