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PLM1_60_b1_redo_sep16_scaffold_1901

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1901_1
unknown

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comp(2..67)
DNA (66bp) protein (22aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1901_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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602..1669
DNA (1068bp) protein (356aa)
Putative aminotransferase class I and II Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBX8_NITGG
aminotransferase class I and II
Putative aminotransferase class I and II {ECO:0000313|EMBL:AFU57055.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1901_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1666..2529
DNA (864bp) protein (288aa)
cobQ; cobyric acid synthase (EC:6.3.5.10)
Probable cobyric acid synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILF9_NITGG
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1901_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2519..3493
DNA (975bp) protein (325aa)
cobD; cobalamin biosynthesis protein CobD (EC:6.3.1.10)
Probable cobalamin biosynthesis protein CobD Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE05_NITGG
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1901_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3483..4229
DNA (747bp) protein (249aa)
cobalamin-5'-phosphate synthase (EC:2.7.8.26)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Cobalamin synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGW4_NITGG
PLM1_60_b1_redo_sep16_scaffold_1901_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4232..4873
DNA (642bp) protein (214aa)
Putative nucleotidyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I710_NITGG
nucleotidyltransferase
Putative nucleotidyltransferase {ECO:0000313|EMBL:AFU57051.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1901_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5068..5346)
DNA (279bp) protein (93aa)
50S ribosomal protein L44e Tax=Candidatus Nitrososphaera gargensis RepID=K0ILF6_NITGG
LSU ribosomal protein L44E
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1901_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5710..6123
DNA (414bp) protein (138aa)
Putative thioesterase superfamily protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGU9_NITGG
thioesterase superfamily protein
Putative thioesterase superfamily protein {ECO:0000313|EMBL:AFU57042.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1901_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6263..6874
DNA (612bp) protein (204aa)
Rieske iron sulfur protein Tax=Cenarchaeum symbiosum (strain A) RepID=A0RTJ3_CENSY
petC; putative Rieske 2Fe-2S domain cytochrome b6-f complex iron-sulfur subunit
Putative Rieske 2Fe-2S domain cytochrome b6-f complex iron-sulfur subunit {ECO:0000313|EMBL:AIC14448.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_1901_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6855..8465
DNA (1611bp) protein (537aa)
Putative cytochrome b/b6/petB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE8_NITGG
petB; putative cytochrome b/b6
Putative cytochrome b/b6 {ECO:0000313|EMBL:AIC14447.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_1901_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8582..9043
DNA (462bp) protein (154aa)
Putative blue (Type 1) copper domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAN2_NITGG
plastocyanin
Plastocyanin {ECO:0000313|EMBL:AIF85553.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1901_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9151..9510)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF30_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58385.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1901_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9558..10076)
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57503.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1901_14
uncultured crenarchaeote, Crenarchaeota, Archaea

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10328..11077
DNA (750bp) protein (250aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
bioD; dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD Tax=uncultured crenarchaeote RepID=Q2V9C9_9CREN
PLM1_60_b1_redo_sep16_scaffold_1901_15
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11005..12060)
DNA (1056bp) protein (352aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
Sua5 superfamily-related protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CW62_9ARCH
sua5 superfamily-like protein
PLM1_60_b1_redo_sep16_scaffold_1901_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12278..12580
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ43_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58172.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1901_17
unknown

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comp(12929..13369)
DNA (441bp) protein (147aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1901_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13821..15098
DNA (1278bp) protein (426aa)
Putative multicopper oxidase type 3 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ING4_NITGG
multicopper oxidase type 3
Putative multicopper oxidase type 3 {ECO:0000313|EMBL:AFU59329.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 18 items

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