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PLM1_60_b1_redo_sep16_scaffold_2015

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2015_1
unknown

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comp(3..677)
DNA (675bp) protein (225aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2015_2
unknown

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comp(740..1132)
DNA (393bp) protein (131aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2015_3
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1321..1794)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1C7_DESTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM23368.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
PLM1_60_b1_redo_sep16_scaffold_2015_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1867..2175
DNA (309bp) protein (103aa)
Putative transcriptional regulator, ArsR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP30_NITGG
putative transcriptional regulator, ArsR family
Putative transcriptional regulator, ArsR family {ECO:0000313|EMBL:AIC16091.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_2015_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2172..2624
DNA (453bp) protein (151aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82529.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_2015_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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2704..3123
DNA (420bp) protein (140aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM1_60_b1_redo_sep16_scaffold_2015_7
unknown

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comp(3281..4153)
DNA (873bp) protein (291aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2015_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4523..4771
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7H2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57181.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2015_9
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4821..6371)
DNA (1551bp) protein (517aa)
permease Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CDFA2
Transporter, major facilitator family protein {ECO:0000313|EMBL:EPA05756.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
major facilitator superfamily transporter
PLM1_60_b1_redo_sep16_scaffold_2015_10
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(6653..7447)
DNA (795bp) protein (265aa)
Uncharacterized protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TYF5_9CYAN
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM1_60_b1_redo_sep16_scaffold_2015_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7929..8222)
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKL1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14482.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_2015_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8399..10495)
DNA (2097bp) protein (699aa)
Putative signal transduction histidine kinase, with phosphoacceptor and ATP binding domain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMJ2_NITGG
signal transduction histidine kinase, with phosphoacceptor and ATP binding domain
Putative signal transduction histidine kinase, with phosphoacceptor and ATP binding domain {ECO:0000313|EMBL:AFU57939.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2015_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10533..11717)
DNA (1185bp) protein (395aa)
putative adenylate cyclase (modular protein) (EC:2.7.3.-)
Putative adenylate cyclase (Modular protein) {ECO:0000313|EMBL:AIC17076.1}; EC=2.7.3.- {ECO:0000313|EMBL:AIC17076.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKR4_9ARCH
PLM1_60_b1_redo_sep16_scaffold_2015_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12170..12697)
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9Z9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58151.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 14 items

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