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PLM1_60_b1_redo_sep16_scaffold_2114

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2114_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(232..633)
DNA (402bp) protein (134aa)
Putative signal transduction response regulator, receiver domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW8_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU58349.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2114_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(826..1506)
DNA (681bp) protein (227aa)
ATP-grasp superfamily enzyme
ATP-grasp superfamily enzyme {ECO:0000313|EMBL:AIF85083.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM1_60_b1_redo_sep16_scaffold_2114_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2106..3134)
DNA (1029bp) protein (343aa)
Putative CorA ion transporter Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILG9_NITGG
CorA ion transporter
Putative CorA ion transporter {ECO:0000313|EMBL:AFU59482.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2114_4
unknown

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comp(3356..3748)
DNA (393bp) protein (131aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2114_5
unknown

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comp(4420..5481)
DNA (1062bp) protein (354aa)
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2114_6
uncultured crenarchaeote, Crenarchaeota, Archaea

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comp(5645..6004)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=uncultured crenarchaeote RepID=Q701W3_9CREN
Uncharacterized protein {ECO:0000313|EMBL:CAF28761.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
exported protein of unknown function
PLM1_60_b1_redo_sep16_scaffold_2114_7
unknown

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comp(6315..6764)
DNA (450bp) protein (150aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2114_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6928..7464
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57144.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2114_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7680..8114)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJZ9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82246.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_2114_10
unknown

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comp(8533..8781)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2114_11
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9079..9702)
DNA (624bp) protein (208aa)
hypothetical protein Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI000371E138
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACD93851.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
PLM1_60_b1_redo_sep16_scaffold_2114_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9710..10402)
DNA (693bp) protein (231aa)
Major intrinsic protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGI3_NITGG
major intrinsic protein
Major intrinsic protein {ECO:0000313|EMBL:AFU60496.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2114_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10374..10802)
DNA (429bp) protein (143aa)
arsenate reductase (EC:1.20.4.1)
Arsenate reductase {ECO:0000313|EMBL:AFU60495.1}; EC=1.20.4.1 {ECO:0000313|EMBL:AFU60495.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Arsenate reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK34_NITGG
PLM1_60_b1_redo_sep16_scaffold_2114_14
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10799..11578)
DNA (780bp) protein (260aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase:UbiE/COQ5 methyltransferase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CV95_9ARCH
Protein-L-isoaspartate(D-aspartate) O-methyltransferase:UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:EGP93210.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
Protein-L-isoaspartate(D-aspartate) O-methyltransferase:UbiE/COQ5 methyltransferase
PLM1_60_b1_redo_sep16_scaffold_2114_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11681..12031
DNA (351bp) protein (117aa)
Putative transcriptional regulator, HxlR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL5_NITGG
transcriptional regulator, HxlR family
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AIF82139.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_2114_16
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12106..12444)
DNA (339bp) protein (113aa)
UPF0060 membrane protein MSBR3_1306 {ECO:0000256|HAMAP-Rule:MF_00010}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
UPF0060 membrane protein Mpet_2032 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Protein of unknown function UPF0060
PLM1_60_b1_redo_sep16_scaffold_2114_17

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comp(12441..12824)
DNA (384bp) protein (128aa)
UPF0060 membrane protein Nmar_1681 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF60857.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
putative inner membrane protein
PLM1_60_b1_redo_sep16_scaffold_2114_18
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12814..13368)
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KJC8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG42406.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
PLM1_60_b1_redo_sep16_scaffold_2114_19
unknown

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comp(13456..14037)
DNA (582bp) protein (194aa)

This feature has no annotations

Displaying 19 items

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