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PLM1_60_b1_redo_sep16_scaffold_5532

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_5532_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(40..1206)
DNA (1167bp) protein (389aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Longispora albida RepID=UPI000373AFF3
1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
PLM1_60_b1_redo_sep16_scaffold_5532_2
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1237..2514)
DNA (1278bp) protein (426aa)
zinc metalloprotease Tax=Micromonospora sp. CNB394 RepID=UPI00038217F6
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ADL44984.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_5532_3
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2517..3773)
DNA (1257bp) protein (419aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9SXP0_MICAI
PLM1_60_b1_redo_sep16_scaffold_5532_4
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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3986..4723
DNA (738bp) protein (246aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI0003492C2B
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACY99299.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_5532_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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4856..6094
DNA (1239bp) protein (413aa)
diguanylate phosphodiesterase Tax=Frankia sp. Iso899 RepID=UPI0003B53E39
diguanylate phosphodiesterase, EAL domain-containing protein
Diguanylate phosphodiesterase, EAL domain-containing protein {ECO:0000313|EMBL:CCH85779.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_60_b1_redo_sep16_scaffold_5532_6
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6220..7800)
DNA (1581bp) protein (527aa)
(2Fe-2S)-binding protein Tax=Frankia sp. Iso899 RepID=UPI0003B5008A
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ADD41897.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_5532_7
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8076..8768
DNA (693bp) protein (231aa)
16S rRNA methyltransferase Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=B5GW92_STRC2
16S rRNA methyltransferase {ECO:0000313|EMBL:EFG09794.1}; Methyltransferase {ECO:0000313|EMBL:EDY50588.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
methyltransferase small
PLM1_60_b1_redo_sep16_scaffold_5532_8
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8741..9286
DNA (546bp) protein (182aa)
tRNA/rRNA methyltransferase Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=B5GW91_STRC2
tRNA/rRNA methyltransferase {ECO:0000313|EMBL:EDY50587.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
tRNA/rRNA methyltransferase SpoU
PLM1_60_b1_redo_sep16_scaffold_5532_9
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(9549..10373)
DNA (825bp) protein (275aa)
Binding-protein-dependent transport systems inner membrane component Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F5J6_VERMA
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEB43028.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_5532_10
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10370..11209)
DNA (840bp) protein (280aa)
Putrescine transport system permease protein PotH Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R6J0_STRVP
Putrescine transport system permease protein PotH
Putrescine transport system permease protein PotH {ECO:0000313|EMBL:CCA58619.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
PLM1_60_b1_redo_sep16_scaffold_5532_11
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11223..12356)
DNA (1134bp) protein (378aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
ABC transporter related Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TBY1_MICAI
ABC transporter-like protein
PLM1_60_b1_redo_sep16_scaffold_5532_12
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(12356..13573)
DNA (1218bp) protein (406aa)
ABC transporter polyamine-binding lipoprotein Tax=Micromonospora sp. ATCC 39149 RepID=C4RQ03_9ACTO
ABC transporter polyamine-binding lipoprotein {ECO:0000313|EMBL:EEP73461.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
family 1 extracellular solute-binding protein
PLM1_60_b1_redo_sep16_scaffold_5532_13
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(13609..13716)
DNA (108bp) protein (36aa)
4-aminobutyraldehyde dehydrogenase (EC:1.2.1.19)
Gamma-aminobutyraldehyde dehydrogenase {ECO:0000313|EMBL:KIF07001.1}; EC=1.2.1.19 {ECO:0000313|EMBL:KIF07001.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
gamma-aminobutyraldehyde dehydrogenase Tax=Streptomyces sp. MspMP-M5 RepID=UPI000362BE9B
PLM1_60_b1_redo_sep16_scaffold_5532_14
unknown

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14320..14433
DNA (114bp) protein (38aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000371714F
Displaying 14 items

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