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PLM1_60_b1_redo_sep16_scaffold_5981

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_5981_1
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..218)
DNA (216bp) protein (72aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
pyruvate dehydrogenase E1 Tax=Longispora albida RepID=UPI000379F14C
transketolase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_5981_2
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(160..1464)
DNA (1305bp) protein (435aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
Transketolase domain protein Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X492_SALTO
transketolase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_5981_3
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1486..1602)
DNA (117bp) protein (39aa)
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:KKD03472.1}; EC=3.5.99.7 {ECO:0000313|EMBL:KKD03472.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
1-aminocyclopropane-1-carboxylate deaminase Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI0003741885
pyridoxal-phosphate-dependent hydrolase
PLM1_60_b1_redo_sep16_scaffold_5981_4
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1744..2460)
DNA (717bp) protein (239aa)
Transcriptional regulator, IclR family (Modular protein) Tax=Micromonospora lupini str. Lupac 08 RepID=I0LD49_9ACTO
Transcriptional regulator, IclR family (Modular protein) {ECO:0000313|EMBL:CCH21746.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
IclR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_5981_5
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2534..3871
DNA (1338bp) protein (446aa)
Uncharacterized protein Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TJB8_AMYOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGM10298.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
PLM1_60_b1_redo_sep16_scaffold_5981_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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3938..5344
DNA (1407bp) protein (469aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7D2_GEOOG
PLM1_60_b1_redo_sep16_scaffold_5981_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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5344..6336
DNA (993bp) protein (331aa)
putative tRNA/rRNA methyltransferase (EC:2.1.1.-)
rRNA methyltransferase Tax=Frankia sp. Iso899 RepID=UPI0003B319DA
rRNA methylase, putative, group 3 {ECO:0000313|EMBL:EXG79463.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_5981_8
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6547..7026)
DNA (480bp) protein (160aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003716C84
Uncharacterized protein {ECO:0000313|EMBL:AJE39601.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_5981_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7216..7941)
DNA (726bp) protein (242aa)
ABC transporter related protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PTY4_STANL
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:EXG79461.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ABC transporter-like protein
Displaying 9 items

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