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PLM1_60_b1_redo_sep16_scaffold_3228

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_3228_1
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..299
DNA (297bp) protein (99aa)
hypothetical protein, partial Tax=Kribbella catacumbae RepID=UPI000366E777
Putative transposase {ECO:0000313|EMBL:GAB92021.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
transposase
PLM1_60_b1_redo_sep16_scaffold_3228_2
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(584..1744)
DNA (1161bp) protein (387aa)
Integrase catalytic region Tax=Frankia sp. (strain EAN1pec) RepID=A8LCY7_FRASN
Mobile element protein {ECO:0000313|EMBL:EWC61448.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
integrase catalytic subunit
PLM1_60_b1_redo_sep16_scaffold_3228_3
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1741..2031)
DNA (291bp) protein (97aa)
Transposase IS3/IS911 family protein Tax=Frankia sp. (strain EAN1pec) RepID=A8L864_FRASN
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABW12178.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_3228_4
unknown

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comp(2283..2393)
DNA (111bp) protein (37aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_3228_5
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2449..4221)
DNA (1773bp) protein (591aa)
Zinc finger SWIM domain-containing protein Tax=Opitutaceae bacterium TAV5 RepID=H1IQG4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH94547.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_3228_6
Mesorhizobium sp. UASWS1009, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4410..6182
DNA (1773bp) protein (591aa)
hypothetical protein Tax=Cohnella laeviribosi RepID=UPI000362345F
Contig119, whole genome shotgun sequence {ECO:0000313|EMBL:KIU55303.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. UASWS1009.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_3228_7
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6289..6732
DNA (444bp) protein (148aa)
hypothetical protein Tax=Saccharopolyspora spinosa RepID=UPI000237AEB9
hypothetical protein
Hypothetical arginine and alanine rich protein {ECO:0000313|EMBL:CCC45160.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
PLM1_60_b1_redo_sep16_scaffold_3228_8
unknown

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comp(6624..6884)
DNA (261bp) protein (87aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_3228_9
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7013..7813)
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3CUA7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC85806.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_3228_10
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7782..8687)
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Frankia sp. QA3 RepID=I9KP26_9ACTO
Probable DNA-binding protein {ECO:0000313|EMBL:CEL13914.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_3228_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8674..9420)
DNA (747bp) protein (249aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRJ4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26202.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_3228_12
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9431..9913
DNA (483bp) protein (161aa)
regulator Tax=Streptomyces sp. CNT372 RepID=UPI00037AACBD
Putative stf protein {ECO:0000313|EMBL:EUA71316.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii 1513.;"
Stf protein
PLM1_60_b1_redo_sep16_scaffold_3228_13
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9921..10490)
DNA (570bp) protein (190aa)
ADP-ribose pyrophosphatase (EC:3.6.1.13)
ADP-ribose pyrophosphatase Tax=Streptomyces sp. PsTaAH-124 RepID=UPI00035E32BE
NUDIX hydrolase {ECO:0000313|EMBL:EXU65038.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
PLM1_60_b1_redo_sep16_scaffold_3228_14
unknown

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comp(10526..11599)
DNA (1074bp) protein (358aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_3228_15
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12765..13163
DNA (399bp) protein (133aa)
Putative phosphoenolpyruvate synthase (Fragment) Tax=Streptomyces chattanoogensis RepID=F1CLA2_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH97493.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
Displaying 15 items

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