ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_3458

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_3458_1
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..776)
DNA (774bp) protein (258aa)
iron ABC transporter permease Tax=Streptomyces RepID=UPI000369105A
Iron ABC transporter permease {ECO:0000313|EMBL:EYR62339.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
iron ABC transporter permease
PLM1_60_b1_redo_sep16_scaffold_3458_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(784..1809)
DNA (1026bp) protein (342aa)
Iron ABC transporter, periplasmic iron-binding protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AX58_STRRD
iron ABC transporter periplasmic iron-binding protein
Iron ABC transporter, periplasmic iron-binding protein {ECO:0000313|EMBL:ACZ90785.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_3458_3
unknown

Not on your lists

comp(1885..2034)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_3458_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2031..3452)
DNA (1422bp) protein (474aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AX59_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ90786.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_3458_5
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3452..4354)
DNA (903bp) protein (301aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000365930C
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EGD44045.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
NAD-dependent epimerase/dehydratase
PLM1_60_b1_redo_sep16_scaffold_3458_6
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4479..6092
DNA (1614bp) protein (538aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00036C4755
glycosyl transferase group 2 family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ACZ90788.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_3458_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6089..7468)
DNA (1380bp) protein (460aa)
Protoporphyrinogen oxidase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AX65_STRRD
protoporphyrinogen oxidase-like protein
Protoporphyrinogen oxidase-like protein {ECO:0000313|EMBL:ACZ90792.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_3458_8
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7721..7975
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Kineosphaera limosa NBRC 100340 RepID=K6WQW1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB96231.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
prevent-host-death family protein
PLM1_60_b1_redo_sep16_scaffold_3458_9
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7972..8397
DNA (426bp) protein (142aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
hypothetical protein Tax=Demetria terragena RepID=UPI00037CA755
PilT domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_3458_10
unknown

Not on your lists

comp(8406..9095)
DNA (690bp) protein (230aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_3458_11
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9336..10238
DNA (903bp) protein (301aa)
Acetyltransferase (GNAT) family protein Tax=Saccharomonospora azurea NA-128 RepID=H8G6Y8_9PSEU
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:EHY87257.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
GCN5-related N-acetyltransferase
PLM1_60_b1_redo_sep16_scaffold_3458_12
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10280..10837)
DNA (558bp) protein (186aa)
Acyltransferase Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WX57_MYCKA
Bifunctional wax ester synthase/acyl-CoA diacylglycerol acyltransferase {ECO:0000313|EMBL:EWM17878.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
diacylglycerol O-acyltransferase
PLM1_60_b1_redo_sep16_scaffold_3458_13
unknown

Not on your lists

10862..11287
DNA (426bp) protein (142aa)

This feature has no annotations

Displaying 13 items

View Taxonomy