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PLM1_60_b1_redo_sep16_scaffold_105

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_105_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(143..1075)
DNA (933bp) protein (311aa)
C4-dicarboxylate ABC transporter substrate-binding protein Tax=Nocardiopsis alba RepID=UPI00034B02EF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00394.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_105_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1098..1901
DNA (804bp) protein (268aa)
Endonuclease/exonuclease/phosphatase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A2E3_THECD
Exonuclease III {ECO:0000313|EMBL:EXG81839.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
endonuclease/exonuclease/phosphatase
PLM1_60_b1_redo_sep16_scaffold_105_3
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1995..3389
DNA (1395bp) protein (465aa)
sodium:dicarboxylate symporter Tax=Nocardiopsis synnemataformans RepID=UPI0003454902
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00390.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_105_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3935..5308
DNA (1374bp) protein (458aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI0003815AD2
Glutamate--cysteine ligase family protein {ECO:0000313|EMBL:EXG80123.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
glutamate/cysteine ligase protein
PLM1_60_b1_redo_sep16_scaffold_105_5
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5383..6708
DNA (1326bp) protein (442aa)
Putative uncharacterized protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TEQ4_MICAI
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61792.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_105_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6710..7483
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JWM6_STREN
TIGR03442 family protein {ECO:0000313|EMBL:EXG80125.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_105_7
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7480..8457
DNA (978bp) protein (326aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N229_KITSK
Histidyl-tRNA synthetase {ECO:0000313|EMBL:KJK59945.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_105_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8599..9426
DNA (828bp) protein (276aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
racE; glutamate racemase (EC:5.1.1.3)
Glutamate racemase Tax=Modestobacter marinus (strain BC501) RepID=I4ETY0_MODMB
PLM1_60_b1_redo_sep16_scaffold_105_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9423..10187
DNA (765bp) protein (255aa)
Putative metal-dependent hydrolase Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXN8_9ACTO
Metal-dependent hydrolase, beta-lactamase superfamily III {ECO:0000313|EMBL:EXG80128.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_105_10
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10205..10609)
DNA (405bp) protein (135aa)
Rhodanese domain protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3E4_THECD
Rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ACY96069.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_105_11
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10606..11109)
DNA (504bp) protein (168aa)
Putative cysteine dioxygenase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GXZ2_ACTM4
Putative metal-dependent enzyme of the double-stranded beta helix superfamily {ECO:0000313|EMBL:EXG80155.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative cysteine dioxygenase
PLM1_60_b1_redo_sep16_scaffold_105_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11448..12566
DNA (1119bp) protein (373aa)
glycosyl transferase family 1 Tax=Streptomyces purpureus RepID=UPI00036C3FC2
Glycosyltransferase {ECO:0000313|EMBL:EXG80130.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
glycosyl transferase family 1
PLM1_60_b1_redo_sep16_scaffold_105_13
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12563..13750
DNA (1188bp) protein (396aa)
Group 1 glycosyl transferase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VS00_9ACTO
Glycosyltransferase {ECO:0000313|EMBL:EXG80131.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
group 1 glycosyl transferase
PLM1_60_b1_redo_sep16_scaffold_105_14
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13737..14465
DNA (729bp) protein (243aa)
rph; RNase PH (EC:2.7.7.56)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Ribonuclease PH Tax=Modestobacter marinus (strain BC501) RepID=I4ETY8_MODMB
PLM1_60_b1_redo_sep16_scaffold_105_15
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14462..15073
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
Non-canonical purine NTP pyrophosphatase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GZI1_ACTM4
putative deoxyribonucleotide triphosphate pyrophosphatase
PLM1_60_b1_redo_sep16_scaffold_105_16
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15284..16399
DNA (1116bp) protein (372aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
DNA methylase N-4/N-6 domain protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q8H3_CATAD
DNA methylase N-4/N-6 domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_105_17
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16486..16779
DNA (294bp) protein (98aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI000368FB59
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK40643.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_105_18
unknown

Not on your lists

16874..16963
DNA (90bp) protein (30aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_105_19
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(16985..17863)
DNA (879bp) protein (293aa)
Tax=GWB1_OD1_49_6_curated
PLM1_60_b1_redo_sep16_scaffold_105_20
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17868..18431)
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Streptomyces turgidiscabies Car8 RepID=L7F6Q5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ELP66340.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
membrane protein
PLM1_60_b1_redo_sep16_scaffold_105_21
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18421..19299)
DNA (879bp) protein (293aa)
Uncharacterized protein Tax=Streptomyces turgidiscabies Car8 RepID=L7F534_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ELP66234.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_105_22
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19550..20200)
DNA (651bp) protein (217aa)
Type II site-specific deoxyribonuclease bin=GWC2_Chloroflexi_73_18 species=Streptomyces somaliensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_60_b1_redo_sep16_scaffold_105_23
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(20204..20440)
DNA (237bp) protein (79aa)
hypothetical protein Tax=Rhodococcus sp. DK17 RepID=UPI000381F9B3
hypothetical protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADW70175.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
PLM1_60_b1_redo_sep16_scaffold_105_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20486..22240
DNA (1755bp) protein (585aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI0003818482
Uncharacterized protein {ECO:0000313|EMBL:EYF04135.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
DNA methylase
PLM1_60_b1_redo_sep16_scaffold_105_25
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22408..23178
DNA (771bp) protein (257aa)
UPI0003CE9D72 related cluster Tax=unknown RepID=UPI0003CE9D72
Uncharacterized protein {ECO:0000313|EMBL:ESY08625.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_105_26
unknown

Not on your lists

comp(23239..23724)
DNA (486bp) protein (162aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_105_27
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23717..24238)
DNA (522bp) protein (174aa)
Uncharacterized protein {ECO:0000313|EMBL:KDN23140.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
PLM1_60_b1_redo_sep16_scaffold_105_28
unknown

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comp(24272..24541)
DNA (270bp) protein (90aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_105_29
unknown

Not on your lists

comp(24745..24936)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_105_30
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24933..25577)
DNA (645bp) protein (215aa)
DivIVA domain protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SGR8_GEOOG
DivIVA domain-containing protein
DivIVA domain protein {ECO:0000313|EMBL:ADB74911.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Displaying items 1-30 of 69 in total

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