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PLM1_60_b1_redo_sep16_scaffold_242

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_242_1
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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1..1323
DNA (1323bp) protein (441aa)
Resolvase-like Tax=Frankia sp. (strain CcI3) RepID=Q2JCD2_FRASC
resolvase-like protein
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:ETA00927.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
PLM1_60_b1_redo_sep16_scaffold_242_2
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1367..2146)
DNA (780bp) protein (260aa)
Transcriptional regulator, IclR family Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7Q7_GEOOG
IclR family transcription regulator
IclR family transcription regulator {ECO:0000313|EMBL:AHH96532.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_242_3
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2271..2690
DNA (420bp) protein (140aa)
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit Tax=Modestobacter marinus (strain BC501) RepID=I4EY59_MODMB
Ferredoxin {ECO:0000313|EMBL:CEL16082.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hcaC; 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit
PLM1_60_b1_redo_sep16_scaffold_242_4
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2690..3880
DNA (1191bp) protein (397aa)
Ferredoxin reductase Tax=Modestobacter marinus (strain BC501) RepID=I4EY60_MODMB
Ferredoxin reductase
Ferredoxin reductase {ECO:0000313|EMBL:CCH88323.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_60_b1_redo_sep16_scaffold_242_5
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4010..4864
DNA (855bp) protein (285aa)
hpcE; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC:4.1.1.- 5.3.3.-)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Tax=Saccharopolyspora erythraea RepID=UPI0001D31567
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:EQD82239.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM1_60_b1_redo_sep16_scaffold_242_6
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4883..5770
DNA (888bp) protein (296aa)
Oxidoreductase domain-containing protein Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CFP2_STRBB
oxidoreductase domain-containing protein
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:ADI04778.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_60_b1_redo_sep16_scaffold_242_7
Verrucosispora sp. MS100047, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5920..6375
DNA (456bp) protein (152aa)
Glucanase {ECO:0000256|RuleBase:RU361186}; EC=3.2.1.- {ECO:0000256|RuleBase:RU361186};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora sp. MS100047.;"
Cellobiohydrolase A (1 4-beta-cellobiosidase A)-like protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F1C7_VERMA
cellobiohydrolase A (1 4-beta-cellobiosidase A)-like protein
PLM1_60_b1_redo_sep16_scaffold_242_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6519..6893)
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B1B0_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ85375.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_242_9
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6975..7400
DNA (426bp) protein (142aa)
ATP/GTP binding protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K3W438_SACES
ATP/GTP binding protein
ATP/GTP binding protein {ECO:0000313|EMBL:CCH27407.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_242_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7617..8042
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4QWY5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETK37446.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_242_11
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7989..8333)
DNA (345bp) protein (115aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00036F519B
Putative amidohydrolase {ECO:0000313|EMBL:CCH19946.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
amidohydrolase family protein
PLM1_60_b1_redo_sep16_scaffold_242_12
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8309..8869)
DNA (561bp) protein (187aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036DD6CE
amidohydrolase family protein
Amidohydrolase family protein {ECO:0000313|EMBL:ACZ89144.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_242_13
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8925..9590
DNA (666bp) protein (222aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LG99_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL17393.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_242_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9512..10450)
DNA (939bp) protein (313aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJR7_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82052.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM1_60_b1_redo_sep16_scaffold_242_15
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10564..11274)
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Rhodococcus sp. EsD8 RepID=N1LZU0_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KDE14844.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_242_16
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11379..12860)
DNA (1482bp) protein (494aa)
hypothetical protein Tax=Streptomyces sp. FxanaC1 RepID=UPI00037D14F2
Lipoprotein {ECO:0000313|EMBL:EJJ08661.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_242_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13038..13730)
DNA (693bp) protein (231aa)
Putative two-component system response regulator Tax=Patulibacter medicamentivorans RepID=H0E8L4_9ACTN
Putative two-component system response regulator {ECO:0000313|EMBL:EHN10014.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
two component LuxR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_242_18
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13727..14992)
DNA (1266bp) protein (422aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00035FF242
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65368.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
histidine kinase
PLM1_60_b1_redo_sep16_scaffold_242_19
unknown

Not on your lists

15120..15263
DNA (144bp) protein (48aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_242_20
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15340..17841
DNA (2502bp) protein (834aa)
DEAD/DEAH box helicase Tax=Actinokineospora enzanensis RepID=UPI0003826484
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:EWM17891.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
DEAD/DEAH box helicase
PLM1_60_b1_redo_sep16_scaffold_242_21
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18048..19694)
DNA (1647bp) protein (549aa)
ABC transporter ATP-binding protein Tax=Streptomyces sp. AA4 RepID=D9UVP3_9ACTO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EFL08364.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
ABC transporter-like protein
PLM1_60_b1_redo_sep16_scaffold_242_22
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19867..20676
DNA (810bp) protein (270aa)
3-oxoadipate CoA-transferase subunit A (EC:2.8.3.6)
3-oxoadipate:succinyl-CoA transferase subunit A Tax=Amycolatopsis alba RepID=UPI000375CB4D
Glutaconate CoA-transferase, subunit A {ECO:0000313|EMBL:EWM12404.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
PLM1_60_b1_redo_sep16_scaffold_242_23
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20673..21431
DNA (759bp) protein (253aa)
3-oxoadipate CoA-transferase subunit B (EC:2.8.3.6)
3-oxoadipate:succinyl-CoA transferase, B subunit Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FGA8_VERMA
Glutaconate CoA-transferase, subunit B {ECO:0000313|EMBL:EWM12405.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
PLM1_60_b1_redo_sep16_scaffold_242_24
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21428..22606
DNA (1179bp) protein (393aa)
thiolase (EC:2.3.1.16)
acetyl-CoA acetyltransferase Tax=Actinopolyspora halophila RepID=UPI0003665FB4
Acetyl-CoA acyltransferase {ECO:0000313|EMBL:EWM12406.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
PLM1_60_b1_redo_sep16_scaffold_242_25
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22682..23410
DNA (729bp) protein (243aa)
pcaH; protocatechuate 3,4-dioxygenase subunit beta (EC:1.13.11.3)
Protocatechuate 3,4-dioxygenase beta chain Tax=Saccharopolyspora erythraea RepID=A4FFG3_SACEN
Protocatechuate 3,4-dioxygenase subunit beta {ECO:0000313|EMBL:EQD81678.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM1_60_b1_redo_sep16_scaffold_242_26
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23407..23976
DNA (570bp) protein (190aa)
protocatechuate 3,4-dioxygenase alpha chain (EC:1.13.11.3)
Protocatechuate 3,4-dioxygenase alpha chain {ECO:0000313|EMBL:AHH95580.1}; EC=1.13.11.3 {ECO:0000313|EMBL:AHH95580.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
Protocatechuate 3,4-dioxygenase alpha chain Tax=Saccharopolyspora erythraea RepID=A4FFG2_SACEN
PLM1_60_b1_redo_sep16_scaffold_242_27
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23951..25378
DNA (1428bp) protein (476aa)
pcaB; 3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2)
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:CCH33372.1}; EC=5.5.1.2 {ECO:0000313|EMBL:CCH33372.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
3-carboxy-cis,cis-muconate cycloisomerase Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K751_SACES
PLM1_60_b1_redo_sep16_scaffold_242_28
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25375..26499
DNA (1125bp) protein (375aa)
hypothetical protein Tax=Nocardiopsis ganjiahuensis RepID=UPI0003498C6A
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:AHH95579.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_242_29
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26521..26976)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BCB5_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ89944.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_242_30
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27079..28518)
DNA (1440bp) protein (480aa)
Peptidase M28 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TA39_MICAI
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ADL46352.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Displaying items 1-30 of 39 in total

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