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PLM1_60_b1_redo_sep16_scaffold_331

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_331_1
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10..1395)
DNA (1386bp) protein (462aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
dihydrolipoyl dehydrogenase Tax=Amycolatopsis nigrescens RepID=UPI00036CFB84
dihydrolipoamide dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_331_2
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1452..1610)
DNA (159bp) protein (53aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PXZ6_KRIFD
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG73466.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
PLM1_60_b1_redo_sep16_scaffold_331_3
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1872..2633
DNA (762bp) protein (254aa)
DeoR family transcriptional regulator Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VT78_9ACTO
DeoR family transcriptional regulator
DeoR family transcriptional regulator {ECO:0000313|EMBL:AGZ38861.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_331_4
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2630..3556
DNA (927bp) protein (309aa)
fruB; 6-phosphofructokinase (EC:2.7.1.56)
Putative 6-phosphofructokinase {ECO:0000313|EMBL:CAM01578.1}; EC=2.7.1.56 {ECO:0000313|EMBL:CAM01578.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
Putative 6-phosphofructokinase Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FC03_SACEN
PLM1_60_b1_redo_sep16_scaffold_331_5
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3593..4933
DNA (1341bp) protein (447aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037BAAF5
family 1 extracellular solute-binding protein
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:AGL14156.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_331_6
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4930..5913
DNA (984bp) protein (328aa)
Putative ABC transporter permease protein Tax=Actinoplanes sp. N902-109 RepID=R4L3V4_9ACTO
putative ABC transporter permease protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:AGL14157.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_331_7
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5910..6761
DNA (852bp) protein (284aa)
Binding-protein-dependent transport systems inner membrane component Tax=Actinoplanes sp. N902-109 RepID=R4L6C3_9ACTO
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AGL14158.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_331_8
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6835..7845
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037AD5B2
Alcohol dehydrogenase {ECO:0000313|EMBL:KIZ17104.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
putative zinc-binding dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_331_9
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7848..8888
DNA (1041bp) protein (347aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003761CC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH95373.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_331_10
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8885..10387
DNA (1503bp) protein (501aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000377B65E
putative L-xylulose kinase
Putative L-xylulose kinase {ECO:0000313|EMBL:AHH95374.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_331_trna_1
unknown

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10520..10593
DNA (74bp)
transferRNA Met
PLM1_60_b1_redo_sep16_scaffold_331_11
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10539..12269)
DNA (1731bp) protein (577aa)
Integrase family protein Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8W8V9_STRFA
integrase
Integrase family protein {ECO:0000313|EMBL:ADP78334.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_60_b1_redo_sep16_scaffold_331_12
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12266..12922)
DNA (657bp) protein (219aa)
Xre family DNA-binding protein Tax=Frankia sp. (strain EuI1c) RepID=E3J644_FRASU
XRE family transcriptional regulator
Xre family DNA-binding protein {ECO:0000313|EMBL:ADP78335.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_60_b1_redo_sep16_scaffold_331_13
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13068..13298
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N4Y5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG80014.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
integrase/resolvase-related protein
PLM1_60_b1_redo_sep16_scaffold_331_14
unknown

Not on your lists

13423..13770
DNA (348bp) protein (116aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_331_15
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13839..14405)
DNA (567bp) protein (189aa)
Putative Zn peptidase Tax=Mycobacterium smegmatis JS623 RepID=L0IVY9_MYCSM
putative Zn peptidase
Putative Zn peptidase {ECO:0000313|EMBL:AGB22131.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
PLM1_60_b1_redo_sep16_scaffold_331_16
unknown

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comp(14438..14794)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_331_17
Corynebacterium efficiens, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15278..17674
DNA (2397bp) protein (799aa)
restriction endonuclease subunit M Tax=Amycolatopsis benzoatilytica RepID=UPI00037F828F
Putative restriction enzyme subunit M {ECO:0000313|EMBL:BAC17067.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM; 11189 / NBRC 100395).;"
restriction enzyme subunit M
PLM1_60_b1_redo_sep16_scaffold_331_18
GWC1_Azotobacter_66_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17667..18974
DNA (1308bp) protein (436aa)
hypothetical protein Tax=Mycobacterium abscessus RepID=UPI00035C1C51
type I restriction-modification system, S subunit
Tax=GWC1_Azotobacter_66_9_curated
PLM1_60_b1_redo_sep16_scaffold_331_19
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18971..22258
DNA (3288bp) protein (1096aa)
DEAD/DEAH box helicase Tax=Mycobacterium abscessus RepID=UPI000304AC3D
Type I restriction-modification system, R subunit {ECO:0000313|EMBL:AEF43144.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
Type I restriction-modification system, R subunit
PLM1_60_b1_redo_sep16_scaffold_331_20
Corynebacterium efficiens, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22255..22977
DNA (723bp) protein (241aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI000362A31B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC17070.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM; 11189 / NBRC 100395).;"
PLM1_60_b1_redo_sep16_scaffold_331_21
GWD2_OD1_42_14, Parcubacteria, Bacteria

Not on your lists

22994..23455
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Dehalococcoides mccartyi GY50 RepID=V5QCS8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKS35641.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_42_14.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_331_22
unknown

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comp(23722..24096)
DNA (375bp) protein (125aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_331_23
CG_Falkow_01, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(24224..25873)
DNA (1650bp) protein (550aa)
UPI0003CFAD8D related cluster Tax=unknown RepID=UPI0003CFAD8D
resolvase domain-containing protein
Tax=CG_Falkow_01
PLM1_60_b1_redo_sep16_scaffold_331_24
unknown

Not on your lists

comp(25977..26240)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_331_25
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26333..27316)
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NHK7_KITSK
Uncharacterized protein {ECO:0000313|EMBL:KJS57066.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_331_26
unknown

Not on your lists

comp(27326..27523)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_331_27
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27594..28166)
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NHL1_KITSK
Uncharacterized protein {ECO:0000313|EMBL:KJS57064.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_331_28
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28253..28855)
DNA (603bp) protein (201aa)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseorubens.;"
ECF subfamily RNA polymerase sigma-24 subunit
ECF subfamily RNA polymerase sigma factor bin=GWF2_Lentisphaerae_50_93 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
PLM1_60_b1_redo_sep16_scaffold_331_29
unknown

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comp(29078..29347)
DNA (270bp) protein (90aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

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