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PLM1_60_b1_redo_sep16_scaffold_352

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_352_1
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..655
DNA (654bp) protein (218aa)
Acyl-CoA dehydrogenase Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JYM0_SACES
Acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CCH29809.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_352_2
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

661..2259
DNA (1599bp) protein (533aa)
mccB; Methylcrotonoyl-CoA carboxylase beta chain (EC:6.4.1.4)
Methylcrotonoyl-CoA carboxylase beta chain {ECO:0000313|EMBL:CCH29810.1}; EC=6.4.1.4 {ECO:0000313|EMBL:CCH29810.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
acetyl-CoA carboxylase Tax=Actinomadura atramentaria RepID=UPI0003700CBE
PLM1_60_b1_redo_sep16_scaffold_352_3
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2268..4286
DNA (2019bp) protein (673aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00037215C6
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EFL06684.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
acetyl/propionyl-CoA carboxylase, biotin carboxylase subunit fused with biotin carboxyl carrier subunit
PLM1_60_b1_redo_sep16_scaffold_352_4
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4322..5482
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase Tax=Saccharomonospora marina XMU15 RepID=H5X9L9_9PSEU
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHR51457.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
acyl-CoA dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_352_5
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5573..5884)
DNA (312bp) protein (104aa)
Predicted protein Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=D6X5S5_STRPR
Predicted protein {ECO:0000313|EMBL:EFH31450.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
PLM1_60_b1_redo_sep16_scaffold_352_6
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6410..7921)
DNA (1512bp) protein (504aa)
hypothetical protein, partial Tax=Actinoalloteichus spitiensis RepID=UPI0003765B64
RNA helicase {ECO:0000313|EMBL:KJK33730.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_352_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8180..9154
DNA (975bp) protein (325aa)
Putative NAD(P)H quinone oxidoreductase, PIG3 family Tax=Saccharomonospora marina XMU15 RepID=H5X292_9PSEU
Putative NAD(P)H quinone oxidoreductase, PIG3 family {ECO:0000313|EMBL:EXG79062.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
NAD(P)H quinone oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_352_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9185..10147)
DNA (963bp) protein (321aa)
hypothetical protein Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003603CD3
Acetyltransferase {ECO:0000313|EMBL:EXG79061.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_352_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10210..10797
DNA (588bp) protein (196aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000362C605
Uncharacterized protein {ECO:0000313|EMBL:EXG79060.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_352_10
unknown

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10853..11380
DNA (528bp) protein (176aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_352_11
unknown

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11382..11891
DNA (510bp) protein (170aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_352_12
unknown

Not on your lists

11888..12436
DNA (549bp) protein (183aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_352_13
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12469..13287)
DNA (819bp) protein (273aa)
Cof-like hydrolase Tax=Micromonospora sp. (strain L5) RepID=E8S515_MICSL
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EXG79059.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
cof-like hydrolase
PLM1_60_b1_redo_sep16_scaffold_352_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13526..14323)
DNA (798bp) protein (266aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003801FA0
Putative HAD superfamily hydrolase {ECO:0000313|EMBL:EXG79055.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
HAD superfamily hydrolase
PLM1_60_b1_redo_sep16_scaffold_352_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14320..15162)
DNA (843bp) protein (281aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003675DED
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EXG79054.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
HAD-superfamily hydrolase
PLM1_60_b1_redo_sep16_scaffold_352_16
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15159..16427)
DNA (1269bp) protein (423aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
seryl-tRNA synthetase Tax=Actinoplanes globisporus RepID=UPI0003655DA4
seryl-tRNA synthetase
PLM1_60_b1_redo_sep16_scaffold_352_17
unknown

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comp(16483..17235)
DNA (753bp) protein (251aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_352_18
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17232..17750)
DNA (519bp) protein (173aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q4B2_CATAD
Uncharacterized protein {ECO:0000313|EMBL:KJY34871.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM1_60_b1_redo_sep16_scaffold_352_19
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17856..19292
DNA (1437bp) protein (479aa)
inosine 5''''-monophosphate dehydrogenase Tax=Streptomyces vitaminophilus RepID=UPI00037E98B6
IMP dehydrogenase family protein {ECO:0000313|EMBL:EXG79051.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
guaB2; putative inosine-5'-monophosphate dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_352_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(19307..20281)
DNA (975bp) protein (325aa)
2-nitropropane dioxygenase-like enzyme (EC:1.13.12.16)
2-nitropropane dioxygenase-like enzyme {ECO:0000313|EMBL:AIF82615.1}; EC=1.13.12.16 {ECO:0000313|EMBL:AIF82615.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
hypothetical protein Tax=Streptomyces purpureus RepID=UPI0003795C21
PLM1_60_b1_redo_sep16_scaffold_352_21
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20455..21159
DNA (705bp) protein (235aa)
DNA alkylation repair enzyme Tax=Frankia sp. (strain EuI1c) RepID=E3IXP7_FRASU
DNA alkylation repair protein
DNA alkylation repair enzyme {ECO:0000313|EMBL:ADP80206.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_60_b1_redo_sep16_scaffold_352_22
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21267..21467)
DNA (201bp) protein (67aa)
cold-shock protein Tax=Sporichthya polymorpha RepID=UPI000365B83F
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ACU76946.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_60_b1_redo_sep16_scaffold_352_23
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(21987..22562)
DNA (576bp) protein (192aa)
TetR-type regulator Tax=Streptomyces tubercidicus RepID=Q595S5_9ACTO
TetR-type regulator
TetR-type regulator {ECO:0000313|EMBL:AJT63356.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
PLM1_60_b1_redo_sep16_scaffold_352_24
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22609..23580
DNA (972bp) protein (324aa)
hypothetical protein Tax=Nocardiopsis valliformis RepID=UPI000370B789
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV85420.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_352_25
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23590..24381
DNA (792bp) protein (264aa)
Methyltransferase type 11 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P555_STRVO
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEM84447.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM1_60_b1_redo_sep16_scaffold_352_26
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24344..24628)
DNA (285bp) protein (95aa)
Ribokinase (EC:2.7.1.15)
Ribokinase Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=D6X920_STRPR
Ribokinase {ECO:0000313|EMBL:AKG46378.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
PLM1_60_b1_redo_sep16_scaffold_352_27
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24622..25257)
DNA (636bp) protein (212aa)
Putative Ribokinase Tax=Streptomyces viridochromogenes Tue57 RepID=L8PB76_STRVR
Ribokinase {ECO:0000313|EMBL:KIF74022.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
ribokinase
PLM1_60_b1_redo_sep16_scaffold_352_28
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25300..25635
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4XDE4_SALTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66621.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_352_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25841..26575
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WC31_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG79048.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_352_30
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26641..27342
DNA (702bp) protein (234aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI00036CD9DC
Uncharacterized protein {ECO:0000313|EMBL:EYU70271.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
hypothetical protein
Displaying items 1-30 of 39 in total

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