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PLM1_60_b1_redo_sep16_scaffold_402

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_402_1
unknown

Not on your lists

24..524
DNA (501bp) protein (167aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI00035C185B
PLM1_60_b1_redo_sep16_scaffold_402_2
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(646..1287)
DNA (642bp) protein (214aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
Peptide methionine sulfoxide reductase MsrA Tax=Actinoplanes sp. N902-109 RepID=R4L578_9ACTO
msrA; peptide methionine sulfoxide reductase
PLM1_60_b1_redo_sep16_scaffold_402_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1347..2798)
DNA (1452bp) protein (484aa)
Transcriptional regulator, GntR family Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA18_PHEZH
GntR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
PLM1_60_b1_redo_sep16_scaffold_402_4
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2852..3502
DNA (651bp) protein (217aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000371DE8D
Membrane protein {ECO:0000313|EMBL:KJK12461.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_402_5
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3735..4394
DNA (660bp) protein (220aa)
DNA-binding protein Tax=Micromonospora sp. CNB394 RepID=UPI00037FAEC2
helix-turn-helix domain-containing protein
LigA protein {ECO:0000313|EMBL:EWM67530.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
PLM1_60_b1_redo_sep16_scaffold_402_6
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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4391..5548
DNA (1158bp) protein (386aa)
cystathionine gamma-lyase (EC:4.4.1.1)
Cystathionine gamma-lyase {ECO:0000313|EMBL:ADG89811.1}; EC=4.4.1.1 {ECO:0000313|EMBL:ADG89811.1};; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
Cystathionine gamma-lyase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y875_THEBD
PLM1_60_b1_redo_sep16_scaffold_402_7
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5545..6024)
DNA (480bp) protein (160aa)
Acetyltransferase, GNAT family Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UUA7_9ACTO
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EGD43304.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
GCN5-like N-acetyltransferase
PLM1_60_b1_redo_sep16_scaffold_402_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6111..7490
DNA (1380bp) protein (460aa)
Amidase {ECO:0000313|EMBL:CCH16103.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CCH16103.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Amidase Tax=Micromonospora lupini str. Lupac 08 RepID=I0KX06_9ACTO
amidase
PLM1_60_b1_redo_sep16_scaffold_402_9
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7528..8064)
DNA (537bp) protein (179aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003754496
Putative integral membrane protein {ECO:0000313|EMBL:EMR00137.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
conjugal transfer protein TrbL
PLM1_60_b1_redo_sep16_scaffold_402_10
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(8104..10068)
DNA (1965bp) protein (655aa)
magnesium-chelatase subunit chlD (EC:6.6.1.1)
Putative magnesium-chelatase subunit chlD {ECO:0000313|EMBL:CCH86436.1}; EC=6.6.1.1 {ECO:0000313|EMBL:CCH86436.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Putative magnesium-chelatase subunit chlD Tax=Modestobacter marinus (strain BC501) RepID=I4ESS3_MODMB
PLM1_60_b1_redo_sep16_scaffold_402_11
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(10070..11491)
DNA (1422bp) protein (474aa)
magnesium chelatase Tax=Frankia sp. Iso899 RepID=UPI0003B5FFAC
putative magnesium chelatase
Putative magnesium chelatase {ECO:0000313|EMBL:ADB73696.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_402_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(11559..12914)
DNA (1356bp) protein (452aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036ED1AB
Cytochrome P450 {ECO:0000313|EMBL:CDM66829.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cytochrome P450
PLM1_60_b1_redo_sep16_scaffold_402_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12996..14213
DNA (1218bp) protein (406aa)
threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase {ECO:0000313|EMBL:AEB42988.1}; EC=4.3.1.19 {ECO:0000313|EMBL:AEB42988.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
threonine dehydratase Tax=Catelliglobosispora koreensis RepID=UPI00036E12E3
PLM1_60_b1_redo_sep16_scaffold_402_14
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14297..16174)
DNA (1878bp) protein (626aa)
Penicillin-binding protein transpeptidase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDX2_GEOOG
penicillin-binding protein transpeptidase
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:ADB76538.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_402_15
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16315..17301
DNA (987bp) protein (329aa)
drrA3; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA (EC:3.6.3.-)
hypothetical protein Tax=Longispora albida RepID=UPI000365A733
Putative Daunorubicin/doxorubicin resistance ATP-binding protein DrrA {ECO:0000313|EMBL:EPH39818.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
PLM1_60_b1_redo_sep16_scaffold_402_16
Streptomyces triostinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17298..18080
DNA (783bp) protein (261aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003728B38
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces triostinicus.;"
multidrug ABC transporter permease protein
PLM1_60_b1_redo_sep16_scaffold_402_17
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18137..18637)
DNA (501bp) protein (167aa)
Transcription elongation factor GreA Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q739_STANL
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_402_18
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18780..19229)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q738_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD40437.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_402_19
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19338..20207
DNA (870bp) protein (290aa)
Mycothiol S-conjugate amidase {ECO:0000256|HAMAP-Rule:MF_01482}; EC=3.5.1.115 {ECO:0000256|HAMAP-Rule:MF_01482};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Mycothiol S-conjugate amidase Mca Tax=Micromonospora lupini str. Lupac 08 RepID=I0KX11_9ACTO
LmbE family protein
PLM1_60_b1_redo_sep16_scaffold_402_20
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20293..20541
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q742_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD40441.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_402_21
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22191..24584
DNA (2394bp) protein (798aa)
Diguanylate cyclase/phosphodiesterase with EAL domain Tax=Micromonospora lupini str. Lupac 08 RepID=I0KX13_9ACTO
Diguanylate cyclase/phosphodiesterase with EAL domain {ECO:0000313|EMBL:CCH16110.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
diguanylate cyclase
PLM1_60_b1_redo_sep16_scaffold_402_22
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24581..26008)
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
Signal transduction histidine kinase Tax=Frankia sp. QA3 RepID=I9KH67_9ACTO
histidine kinase
PLM1_60_b1_redo_sep16_scaffold_402_23
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26005..26697)
DNA (693bp) protein (231aa)
Response regulator mprA Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S2K0_ACTS5
mprA; response regulator mprA
Response regulator mprA {ECO:0000313|EMBL:AEV86080.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_402_24
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26840..28330
DNA (1491bp) protein (497aa)
CHAD domain containing protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9W8_NAKMY
CHAD domain-containing protein
CHAD domain containing protein {ECO:0000313|EMBL:ACV81168.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_60_b1_redo_sep16_scaffold_402_25
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28341..30287
DNA (1947bp) protein (649aa)
N-acylglucosamine 2-epimerase Tax=Actinoplanes sp. N902-109 RepID=R4LG01_9ACTO
n-acylglucosamine 2-epimerase
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:AGL14644.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_402_26
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30364..32652
DNA (2289bp) protein (763aa)
asparagine synthase (EC:6.3.5.4)
Putative asparagine synthetase, glutamine-hydrolyzing Tax=Janibacter sp. HTCC2649 RepID=A3TQ63_9MICO
Putative asparagine synthetase, glutamine-hydrolyzing {ECO:0000313|EMBL:EAP97309.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
PLM1_60_b1_redo_sep16_scaffold_402_27
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32890..33519
DNA (630bp) protein (210aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003717F9F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGM09491.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
PLM1_60_b1_redo_sep16_scaffold_402_28
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33604..34227)
DNA (624bp) protein (208aa)
membrane protein Tax=Micromonospora sp. CNB394 RepID=UPI0003768760
Channel protein, hemolysin III family {ECO:0000313|EMBL:EWM66685.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
channel protein, hemolysin III family
Displaying 28 items

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