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PLM1_60_b1_redo_sep16_scaffold_445

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_445_1
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(90..257)
DNA (168bp) protein (56aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI00037CB720
Regulatory protein
Diguanylate cyclase {ECO:0000313|EMBL:KIZ14785.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
PLM1_60_b1_redo_sep16_scaffold_445_2
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(254..1339)
DNA (1086bp) protein (362aa)
Transcriptional regulator Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SS20_AMYOR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGM02976.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
PLM1_60_b1_redo_sep16_scaffold_445_3
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1411..2532)
DNA (1122bp) protein (374aa)
acoC; branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.12)
Acetoin dehydrogenase, dihydrolipoamide acetyltransferase component {ECO:0000313|EMBL:CAM04024.1}; EC=2.3.1.12 {ECO:0000313|EMBL:CAM04024.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
Acetoin dehydrogenase, dihydrolipoamide acetyltransferase component Tax=Saccharopolyspora erythraea RepID=A4FIZ9_SACEN
PLM1_60_b1_redo_sep16_scaffold_445_4
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2535..3086)
DNA (552bp) protein (184aa)
acoB; acetoin dehydrogenase subunit beta (EC:1.2.4.1)
Acetoin dehydrogenase, beta subunit Tax=Saccharopolyspora erythraea RepID=A4FIZ8_SACEN
Pyruvate dehydrogenase {ECO:0000313|EMBL:KEI45525.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
PLM1_60_b1_redo_sep16_scaffold_445_5
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3089..3442)
DNA (354bp) protein (118aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit Tax=Saccharomonospora marina XMU15 RepID=H5X539_9PSEU
Pyruvate dehydrogenase {ECO:0000313|EMBL:KEI45525.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
acetoin dehydrogenase subunit beta
PLM1_60_b1_redo_sep16_scaffold_445_6
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3454..4449)
DNA (996bp) protein (332aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit Tax=Saccharomonospora marina XMU15 RepID=H5X540_9PSEU
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit {ECO:0000313|EMBL:EHR53372.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
acetoin dehydrogenase E1 component, alpha subunit
PLM1_60_b1_redo_sep16_scaffold_445_7
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4446..5471)
DNA (1026bp) protein (342aa)
ATP-NAD kinase Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HFI6_9PSEU
ATP-NAD kinase
ATP-NAD kinase {ECO:0000313|EMBL:EOD57179.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
PLM1_60_b1_redo_sep16_scaffold_445_8
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(5798..6328)
DNA (531bp) protein (177aa)
Phage integrase Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IXN6_DEIGD
phage integrase
Phage integrase {ECO:0000313|EMBL:ABF45998.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
PLM1_60_b1_redo_sep16_scaffold_445_9
Gordonia rubripertincta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6424..7446)
DNA (1023bp) protein (341aa)
Reductase Tax=Gordonia rubripertincta RepID=Q53028_GORRU
Reductase {ECO:0000313|EMBL:BAA07115.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rubripertincta (Rhodococcus corallinus).;"
oxidoreductase FAD/NAD(P)-binding subunit
PLM1_60_b1_redo_sep16_scaffold_445_10
Gordonia rubripertincta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7456..8961)
DNA (1506bp) protein (502aa)
Epoxidase subunit Tax=Gordonia rubripertincta RepID=Q53027_GORRU
Epoxidase subunit {ECO:0000313|EMBL:BAA07114.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rubripertincta (Rhodococcus corallinus).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_445_11
Gordonia rubripertincta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9008..9331)
DNA (324bp) protein (108aa)
Coupling protein Tax=Gordonia rubripertincta RepID=Q53026_GORRU
Coupling protein {ECO:0000313|EMBL:BAA07113.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rubripertincta (Rhodococcus corallinus).;"
monooxygenase component MmoB/DmpM
PLM1_60_b1_redo_sep16_scaffold_445_12
Gordonia rubripertincta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9383..10405)
DNA (1023bp) protein (341aa)
Epoxidase subunit Tax=Gordonia rubripertincta RepID=Q53025_GORRU
Epoxidase subunit {ECO:0000313|EMBL:BAA07112.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rubripertincta (Rhodococcus corallinus).;"
Methane/Phenol/Toluene Hydroxylase
PLM1_60_b1_redo_sep16_scaffold_445_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10501..11610)
DNA (1110bp) protein (370aa)
methionine synthase (B12-independent) (EC:2.1.1.14)
Epoxyalkane: coenzyme M transferase {ECO:0000313|EMBL:AAV52081.1}; Methionine synthase (B12-independent) {ECO:0000313|EMBL:ABL79394.1}; EC=2.1.1.14 {ECO:0000313|EMBL:ABL79394.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Epoxyalkane: coenzyme M transferase Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=Q5U9J8_NOCSJ
PLM1_60_b1_redo_sep16_scaffold_445_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11671..13803)
DNA (2133bp) protein (711aa)
CoA-binding domain protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SC93_NOCSJ
CoA-binding domain-containing protein
CoA-binding domain protein {ECO:0000313|EMBL:ABL79428.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM1_60_b1_redo_sep16_scaffold_445_15
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13797..14627)
DNA (831bp) protein (277aa)
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BS71_MYCCN
acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit {ECO:0000313|EMBL:AFM20128.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_60_b1_redo_sep16_scaffold_445_16
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14624..15544)
DNA (921bp) protein (307aa)
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BS70_MYCCN
acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit {ECO:0000313|EMBL:AFM20127.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_60_b1_redo_sep16_scaffold_445_17
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15557..16330)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BS69_MYCCN
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AFM20126.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_60_b1_redo_sep16_scaffold_445_18
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16353..17120)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SC75_NOCSJ
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABL79410.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM1_60_b1_redo_sep16_scaffold_445_19
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17124..18494)
DNA (1371bp) protein (457aa)
NAD(FAD)-dependent dehydrogenase Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BS67_MYCCN
NAD(FAD)-dependent dehydrogenase
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:AFM20124.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_60_b1_redo_sep16_scaffold_445_20
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18666..19439
DNA (774bp) protein (258aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI0003771E9B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM20123.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_60_b1_redo_sep16_scaffold_445_21
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19436..20341
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Mycobacterium RepID=I4BS65_MYCCN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM20122.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_60_b1_redo_sep16_scaffold_445_22
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20352..21719
DNA (1368bp) protein (456aa)
Adenylosuccinate lyase Tax=Mycobacterium RepID=G8RJA0_MYCRN
adenylosuccinate lyase
Adenylosuccinate lyase {ECO:0000313|EMBL:AEV73470.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
PLM1_60_b1_redo_sep16_scaffold_445_23
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21716..22696
DNA (981bp) protein (327aa)
1-aminocyclopropane-1-carboxylate deaminase (EC:4.4.1.15)
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:AFM20121.1}; EC=4.4.1.15 {ECO:0000313|EMBL:AFM20121.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
1-aminocyclopropane-1-carboxylate deaminase Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BS64_MYCCN
PLM1_60_b1_redo_sep16_scaffold_445_24
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22714..24213
DNA (1500bp) protein (500aa)
Argininosuccinate lyase Tax=Mycobacterium RepID=G8RJA2_MYCRN
argininosuccinate lyase
Argininosuccinate lyase {ECO:0000313|EMBL:AEV73472.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
PLM1_60_b1_redo_sep16_scaffold_445_25
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24235..25800)
DNA (1566bp) protein (522aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BS60_MYCCN
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component {ECO:0000313|EMBL:AFM20117.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_60_b1_redo_sep16_scaffold_445_26
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25920..27335
DNA (1416bp) protein (472aa)
NAD-dependent aldehyde dehydrogenase Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BS59_MYCCN
NAD-dependent aldehyde dehydrogenase
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:AFM20116.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_60_b1_redo_sep16_scaffold_445_27
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27351..29033)
DNA (1683bp) protein (561aa)
Transcriptional regulator, CdaR family Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SC72_NOCSJ
CdaR family transcriptional regulator
Transcriptional regulator, CdaR family {ECO:0000313|EMBL:ABL79407.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM1_60_b1_redo_sep16_scaffold_445_28
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29036..29647)
DNA (612bp) protein (204aa)
Protein kinase family protein Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BS54_MYCCN
protein kinase family protein
Protein kinase family protein {ECO:0000313|EMBL:AFM20111.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_60_b1_redo_sep16_scaffold_445_29
unknown

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30635..31624
DNA (990bp) protein (330aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_445_30
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31656..31928)
DNA (273bp) protein (91aa)
Alkylmercury lyase Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WJ17_MYCKA
Alkylmercury lyase {ECO:0000313|EMBL:ETW21995.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
alkylmercury lyase
Displaying items 1-30 of 38 in total

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