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PLM1_60_b1_redo_sep16_scaffold_468

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_468_1
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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3..1586
DNA (1584bp) protein (528aa)
kojibiose phosphorylase (EC:2.4.1.230)
Kojibiose phosphorylase {ECO:0000313|EMBL:ABS02960.1}; EC=2.4.1.230 {ECO:0000313|EMBL:ABS02960.1};; species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
Kojibiose phosphorylase Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W821_KINRD
PLM1_60_b1_redo_sep16_scaffold_468_2
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1644..2141)
DNA (498bp) protein (166aa)
Organic hydroperoxide resistance protein ohrA Tax=Frankia sp. Iso899 RepID=UPI0003B3FE12
Uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:AHK28636.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
PLM1_60_b1_redo_sep16_scaffold_468_3
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2649..3011
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Saccharopolyspora erythraea RepID=A4FMY8_SACEN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAM05413.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM1_60_b1_redo_sep16_scaffold_468_4
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3338..4099
DNA (762bp) protein (254aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Actinoplanes sp. N902-109 RepID=R4LXK1_9ACTO
ATP-NAD/AcoX kinase
PLM1_60_b1_redo_sep16_scaffold_468_5
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4113..6476)
DNA (2364bp) protein (788aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00035F3491
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADB34541.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_468_6
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6788..7252
DNA (465bp) protein (155aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CEL23521.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CEL23521.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ASK8_STRRD
PLM1_60_b1_redo_sep16_scaffold_468_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7280..7732
DNA (453bp) protein (151aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00035FD360
serine/threonine protein kinase-like protein
Serine/threonine protein kinase-like protein {ECO:0000313|EMBL:ACZ90736.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_468_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8512..8916)
DNA (405bp) protein (135aa)
Peptidase S1 and S6 chymotrypsin/Hap Tax=Micromonospora lupini str. Lupac 08 RepID=I0LEP8_9ACTO
putative trypsin-like serine protease
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:CCH22295.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
PLM1_60_b1_redo_sep16_scaffold_468_9
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8992..10923
DNA (1932bp) protein (644aa)
amino acid transporter Tax=Amycolatopsis balhimycina RepID=UPI00036B083F
Amino acid transporter {ECO:0000313|EMBL:KDN17192.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
amino acid transporter
PLM1_60_b1_redo_sep16_scaffold_468_10
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11050..12066
DNA (1017bp) protein (339aa)
beta-ketoacyl-acyl-carrier-protein synthase I (EC:2.3.1.41)
3-oxoacyl-acyl carrier synthase protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=BJP_08E140C01_Xanthomonadales_64_42
PLM1_60_b1_redo_sep16_scaffold_468_11
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12169..12834
DNA (666bp) protein (222aa)
O-methyltransferase family protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JZH2_SACES
Putative methyltransferase {ECO:0000313|EMBL:GAJ83828.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
O-methyltransferase family protein
PLM1_60_b1_redo_sep16_scaffold_468_12
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12831..13511
DNA (681bp) protein (227aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003774C75
siderophore-interacting protein
Siderophore-interacting protein {ECO:0000313|EMBL:ABK52684.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_60_b1_redo_sep16_scaffold_468_13
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13632..14240
DNA (609bp) protein (203aa)
TetR family transcriptional regulator Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EY23_9NOCA
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AFU00491.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
PLM1_60_b1_redo_sep16_scaffold_468_14
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14303..14962)
DNA (660bp) protein (220aa)
hypothetical protein Tax=Streptomyces sp. Amel2xE9 RepID=UPI00037AA15B
Hydrolytic protein {ECO:0000313|EMBL:EFF93382.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
hydrolytic protein
PLM1_60_b1_redo_sep16_scaffold_468_15
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14988..16052)
DNA (1065bp) protein (355aa)
serine/threonine protein kinase (EC:2.7.10.2)
Serine/threonine protein kinase {ECO:0000313|EMBL:AEH10298.1}; EC=2.7.10.2 {ECO:0000313|EMBL:AEH10298.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Serine/threonine protein kinase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AWS3_FRADG
PLM1_60_b1_redo_sep16_scaffold_468_16
unknown

Not on your lists

comp(16006..16161)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_468_17
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16189..17226)
DNA (1038bp) protein (346aa)
acyl-CoA dehydrogenase Tax=Frankia sp. Iso899 RepID=UPI0003B32081
Acyl-CoA dehydrogenase fadE25 {ECO:0000313|EMBL:EWM15833.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_468_18
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17760..18902
DNA (1143bp) protein (381aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI0003809480
Uncharacterized protein {ECO:0000313|EMBL:KDS85514.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
two-component system sensor kinase
PLM1_60_b1_redo_sep16_scaffold_468_19
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19317..20105)
DNA (789bp) protein (263aa)
IclR family transcriptional regulator Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FGB4_VERMA
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AEB45052.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_468_20
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20457..22238
DNA (1782bp) protein (594aa)
hypothetical protein Tax=Mycobacterium avium RepID=UPI00030F5ECB
PEP-utilizing protein mobile subunit {ECO:0000313|EMBL:AJE42314.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
PEP-utilizing protein mobile subunit
PLM1_60_b1_redo_sep16_scaffold_468_21
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22235..23179
DNA (945bp) protein (315aa)
pyruvate, water dikinase (EC:2.7.9.2)
hypothetical protein Tax=Mycobacterium avium RepID=UPI0002EF711B
Pyruvate kinase {ECO:0000313|EMBL:AJE42313.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
PLM1_60_b1_redo_sep16_scaffold_468_22
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23139..23960)
DNA (822bp) protein (274aa)
Alpha/beta-fold C-C bond hydrolase Tax=Rhodococcus ruber BKS 20-38 RepID=M2YY47_9NOCA
2-hydroxy-6-oxo-2,4-heptadienoate hydrolase {ECO:0000313|EMBL:AKE87976.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
alpha/beta-fold C-C bond hydrolase
PLM1_60_b1_redo_sep16_scaffold_468_23
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23957..24400)
DNA (444bp) protein (148aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3J5_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY96120.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_468_24
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24605..25615
DNA (1011bp) protein (337aa)
Phenol 2-monooxygenase (EC:1.14.13.7)
Phenol 2-monooxygenase {ECO:0000313|EMBL:ACY96121.1}; EC=1.14.13.7 {ECO:0000313|EMBL:ACY96121.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Phenol 2-monooxygenase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3J6_THECD
PLM1_60_b1_redo_sep16_scaffold_468_25
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25772..26062
DNA (291bp) protein (97aa)
Monooxygenase component MmoB/DmpM Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3J7_THECD
monooxygenase component MmoB/DmpM
Monooxygenase component MmoB/DmpM {ECO:0000313|EMBL:ACY96122.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_468_26
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26073..27581
DNA (1509bp) protein (503aa)
Methane/phenol/toluene hydroxylase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3J8_THECD
methane/phenol/toluene hydroxylase
Methane/phenol/toluene hydroxylase {ECO:0000313|EMBL:ACY96123.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_468_27
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27584..27907
DNA (324bp) protein (108aa)
Phenol hydroxylase subunit P4 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3J9_THECD
phenol hydroxylase subunit P4
Phenol hydroxylase subunit P4 {ECO:0000313|EMBL:ACY96124.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_468_28
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27913..28260
DNA (348bp) protein (116aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI0003809580
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ACY96125.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_468_29
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28260..29171
DNA (912bp) protein (304aa)
catechol 2,3 dioxygenase (EC:1.13.11.2)
Catechol 2,3 dioxygenase {ECO:0000313|EMBL:ACY96126.1}; EC=1.13.11.2 {ECO:0000313|EMBL:ACY96126.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Catechol 2,3 dioxygenase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3K1_THECD
PLM1_60_b1_redo_sep16_scaffold_468_30
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29209..30261
DNA (1053bp) protein (351aa)
ferredoxin Tax=Mycobacterium avium RepID=UPI000316E442
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACY96127.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Displaying items 1-30 of 33 in total

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