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PLM1_60_b1_redo_sep16_scaffold_535

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_535_1
unknown

Not on your lists

454..936
DNA (483bp) protein (161aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_535_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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933..1265
DNA (333bp) protein (111aa)
Transcriptional regulator, MarR/EmrR family protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B0D2_STRRD
MarR/EmrR family transcriptional regulator
Transcriptional regulator, MarR/EmrR family protein {ECO:0000313|EMBL:ACZ89138.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_535_3
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1291..1470)
DNA (180bp) protein (60aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F8Y4_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDN83508.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
PLM1_60_b1_redo_sep16_scaffold_535_4
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1474..5220)
DNA (3747bp) protein (1249aa)
Alpha-ketoglutarate decarboxylase {ECO:0000313|EMBL:AGZ45848.1}; EC=4.1.1.71 {ECO:0000313|EMBL:AGZ45848.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
kgd; alpha-ketoglutarate decarboxylase (EC:4.1.1.71)
Alpha-ketoglutarate decarboxylase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W9F8_9ACTO
PLM1_60_b1_redo_sep16_scaffold_535_5
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5413..6273)
DNA (861bp) protein (287aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RQU6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP71502.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_535_6
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6270..7175)
DNA (906bp) protein (302aa)
ABC transporter related protein Tax=Micromonospora sp. (strain L5) RepID=E8SC49_MICSL
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ADL48726.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_535_7
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7235..8797)
DNA (1563bp) protein (521aa)
Putative phytoene dehydrogenase Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYF3_9ACTO
Putative phytoene dehydrogenase {ECO:0000313|EMBL:CCH16600.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
fad dependent oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_535_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8912..9343)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDE4_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81634.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_60_b1_redo_sep16_scaffold_535_9
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9429..10118
DNA (690bp) protein (230aa)
UPI0003D00490 related cluster Tax=unknown RepID=UPI0003D00490
Uncharacterized protein {ECO:0000313|EMBL:ETA00152.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
PLM1_60_b1_redo_sep16_scaffold_535_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10290..10580
DNA (291bp) protein (97aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00037F4967
Uncharacterized protein {ECO:0000313|EMBL:EXG80413.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
SCC53.06; hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_535_11
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10688..11038)
DNA (351bp) protein (117aa)
anti-sigma factor antagonist Tax=Salinispora pacifica RepID=UPI000374C20A
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
anti-sigma factor antagonist
PLM1_60_b1_redo_sep16_scaffold_535_12
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11454..12296
DNA (843bp) protein (281aa)
Transcriptional regulator, GntR family Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y6D3_THEBD
GntR family transcriptional regulator {ECO:0000313|EMBL:KIH99328.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
GntR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_535_13
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12351..12746
DNA (396bp) protein (132aa)
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI00036B3CC3
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62309.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_535_14
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13008..13880)
DNA (873bp) protein (291aa)
gluconolactonase (EC:3.1.1.17)
UPI0003CF8430 related cluster Tax=unknown RepID=UPI0003CF8430
Uncharacterized protein {ECO:0000313|EMBL:ESY64057.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
PLM1_60_b1_redo_sep16_scaffold_535_15
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14026..15372)
DNA (1347bp) protein (449aa)
Formiminoglutamate deiminase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ABX7_THECD
formiminoglutamate deiminase
Formiminoglutamate deiminase {ECO:0000313|EMBL:ACY99150.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_535_16
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15363..16556)
DNA (1194bp) protein (398aa)
allantoate amidohydrolase (EC:3.5.1.87)
hypothetical protein Tax=Mycobacterium sp. 155 RepID=UPI00036209EB
Allantoate amidohydrolase {ECO:0000313|EMBL:CDO22954.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
PLM1_60_b1_redo_sep16_scaffold_535_17
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16724..17515
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PZA4_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD41578.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_535_18
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17598..20000
DNA (2403bp) protein (801aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
glycosyl transferase Tax=Salinispora pacifica RepID=UPI000368B2D5
Membrane carboxypeptidase (Penicillin-binding protein) {ECO:0000313|EMBL:EXG79238.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_535_19
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20045..21775)
DNA (1731bp) protein (577aa)
malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Malto-oligosyltrehalose trehalohydrolase Tax=Micromonospora sp. (strain L5) RepID=E8SDI0_MICSL
PLM1_60_b1_redo_sep16_scaffold_535_20
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21851..23395)
DNA (1545bp) protein (515aa)
Putative signaling protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S8H6_ACTS5
putative signaling protein
Putative signaling protein {ECO:0000313|EMBL:AEV85073.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_535_21
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23540..25813)
DNA (2274bp) protein (758aa)
maltooligosyl trehalose synthase (EC:5.4.99.15)
Maltooligosyl trehalose synthase {ECO:0000313|EMBL:AEB45764.1}; EC=5.4.99.15 {ECO:0000313|EMBL:AEB45764.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
Maltooligosyl trehalose synthase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F8M1_VERMA
PLM1_60_b1_redo_sep16_scaffold_535_22
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25813..27921)
DNA (2109bp) protein (703aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Glycogen debranching enzyme Tax=Micromonospora lupini str. Lupac 08 RepID=I0L3C1_9ACTO
glycogen debranching enzyme glgx
PLM1_60_b1_redo_sep16_scaffold_535_23
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28033..30078
DNA (2046bp) protein (682aa)
hypothetical protein Tax=Streptomyces sp. KhCrAH-244 RepID=UPI00037059C4
serine/threonine kinase
Serine/threonine kinase {ECO:0000313|EMBL:AIR96300.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
Displaying 23 items

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