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PLM1_60_b1_redo_sep16_scaffold_543

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_543_1
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(685..3093)
DNA (2409bp) protein (803aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035C33C8
TPR repeat-containing protein
TPR repeat-containing protein {ECO:0000313|EMBL:AGZ41459.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_543_2
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3561..12554
DNA (8994bp) protein (2998aa)
hypothetical protein Tax=Nocardiopsis halophila RepID=UPI000376A3D8
Uncharacterized protein {ECO:0000313|EMBL:KDN17974.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
Conserved putative secreted protein
PLM1_60_b1_redo_sep16_scaffold_543_3
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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12571..16581
DNA (4011bp) protein (1337aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B5E387
peptidase S8 and S53 subtilisin kexin sedolisin
Tax=RBG_16_KB1_OP1_55_9_curated
PLM1_60_b1_redo_sep16_scaffold_543_4
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18599..19048
DNA (450bp) protein (150aa)
ATP dependent DNA ligase Tax=Actinoplanes sp. N902-109 RepID=R4LNW6_9ACTO
ligC; ATP dependent DNA ligase
ATP dependent DNA ligase {ECO:0000313|EMBL:AGL20163.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_543_5
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19187..19537
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6R9I6_NOCCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCF66165.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
PLM1_60_b1_redo_sep16_scaffold_543_6
unknown

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19697..19933
DNA (237bp) protein (79aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_543_7
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20225..21289
DNA (1065bp) protein (355aa)
integrase Tax=Frankia sp. BCU110501 RepID=UPI000366E905
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ABW09868.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_543_8
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21301..21606)
DNA (306bp) protein (102aa)
Transcriptional regulator, AraC family Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PPK3_KRIFD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADB30965.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_543_9
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21717..22805)
DNA (1089bp) protein (363aa)
glycosyl transferase family 1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000378542C
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EWC58841.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Glycosyltransferase
PLM1_60_b1_redo_sep16_scaffold_543_10
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22802..23635)
DNA (834bp) protein (278aa)
apolipoprotein N- acyltransferase Tax=Streptomyces acidiscabies RepID=UPI0002889520
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:AIJ23739.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_543_11
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23632..24477)
DNA (846bp) protein (282aa)
apolipoprotein N- acyltransferase Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003622F60
hydrolase, carbon-nitrogen family
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:AIJ23738.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_543_12
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24489..25928)
DNA (1440bp) protein (480aa)
AIR synthase Tax=Streptomyces sp. R1-NS-10 RepID=UPI00036C6215
thiL; GCN5-like N-acetyltransferase
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AIJ23737.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_543_13
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25933..27024)
DNA (1092bp) protein (364aa)
radical SAM protein Tax=Streptomyces acidiscabies RepID=UPI00028A170D
lipoic acid synthetase
Lipoic acid synthetase {ECO:0000313|EMBL:AGL19200.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_543_14
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27034..27555)
DNA (522bp) protein (174aa)
DsrE family protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037AA6C5
MSMEG_0572 family protein {ECO:0000313|EMBL:KID29758.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_543_15
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27552..28403)
DNA (852bp) protein (284aa)
amidohydrolase Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003651FE2
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AIJ23734.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_543_16
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28416..29726)
DNA (1311bp) protein (437aa)
FAD-dependent oxidoreductase Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003640635
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ43462.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_543_17
unknown

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comp(29905..30129)
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying 17 items

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