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PLM1_60_b1_redo_sep16_scaffold_569

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_569_1
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3..320
DNA (318bp) protein (106aa)
Uncharacterized protein (Fragment) Tax=Actinomadura madurae LIID-AJ290 RepID=U2NYA9_9ACTO
decarboxylase
Decarboxylase protein {ECO:0000313|EMBL:ADI04648.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_60_b1_redo_sep16_scaffold_569_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(372..1283)
DNA (912bp) protein (304aa)
Putative oxidoreductase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BC25_STRRD
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:ACZ88048.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_569_3
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(1311..2786)
DNA (1476bp) protein (492aa)
hypothetical protein Tax=Streptomyces sp. AA1529 RepID=UPI0002D9897E
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM1_60_b1_redo_sep16_scaffold_569_4
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2881..3807
DNA (927bp) protein (309aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PJI1_9ACTO
Dioxygenase {ECO:0000313|EMBL:EXU64926.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
PLM1_60_b1_redo_sep16_scaffold_569_5
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3804..4157
DNA (354bp) protein (118aa)
Ketosteroid isomerase-like protein Tax=Rhizobium sp. AP16 RepID=J2DXU5_9RHIZ
Ketosteroid isomerase-like protein {ECO:0000313|EMBL:EJK88052.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_569_6
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4168..5103
DNA (936bp) protein (312aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PC57_9ACTO
Glyoxalase {ECO:0000313|EMBL:EWT07656.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM1_60_b1_redo_sep16_scaffold_569_7
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5111..5893)
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MLB8_9ACTO
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:ADI04638.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_60_b1_redo_sep16_scaffold_569_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5978..6364
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N4G8_9ACTO
YciI-related domain-containing protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM1_60_b1_redo_sep16_scaffold_569_9
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6449..7339
DNA (891bp) protein (297aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PJI7_9ACTO
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EUC18788.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
6-phosphogluconate dehydrogenase protein
PLM1_60_b1_redo_sep16_scaffold_569_10
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7336..8235
DNA (900bp) protein (300aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PC62_9ACTO
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KDN73497.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
PLM1_60_b1_redo_sep16_scaffold_569_11
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8232..8714
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CDY5_STRBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI04650.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_60_b1_redo_sep16_scaffold_569_trna_1
unknown

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8943..9015
DNA (73bp)
transferRNA Ala
PLM1_60_b1_redo_sep16_scaffold_569_12
Streptomyces sp. PAMC26508, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9173..10204)
DNA (1032bp) protein (344aa)
Transcriptional regulator Tax=Streptomyces sp. PAMC26508 RepID=M9TRP4_9ACTO
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGJ53179.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PAMC26508.;"
PLM1_60_b1_redo_sep16_scaffold_569_13
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10236..11264)
DNA (1029bp) protein (343aa)
Sugar ABC transporter, permease protein Tax=Streptomyces lasaliensis RepID=B5M9P3_STRLS
ATPase {ECO:0000313|EMBL:AJE43385.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
inner-membrane translocator
PLM1_60_b1_redo_sep16_scaffold_569_14
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11261..12226)
DNA (966bp) protein (322aa)
Ribose transport system permease rbsC Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HHS2_STRPR
ATPase {ECO:0000313|EMBL:AJE43386.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
ABC-type transporter, integral membrane subunit
PLM1_60_b1_redo_sep16_scaffold_569_15
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12219..13757)
DNA (1539bp) protein (513aa)
ABC transporter related protein Tax=Streptomyces sp. SirexAA-E RepID=G2ND89_9ACTO
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJE43387.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
ABC transporter-like protein
PLM1_60_b1_redo_sep16_scaffold_569_16
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13985..15067)
DNA (1083bp) protein (361aa)
Sugar uptake ABC transporter periplasmic solute-binding protein Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HHS0_STRPR
Sugar uptake ABC transporter periplasmic solute-binding protein {ECO:0000313|EMBL:EDY66381.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
sugar uptake ABC transporter solute-binding protein
PLM1_60_b1_redo_sep16_scaffold_569_17
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15371..17908
DNA (2538bp) protein (846aa)
Putative hydrolase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W3X7_9ACTO
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:AGZ43727.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_569_18
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18443..21202
DNA (2760bp) protein (920aa)
Alpha-L-arabinofuranosidase B Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VPQ0_9ACTO
alpha-L-arabinofuranosidase B
Alpha-L-arabinofuranosidase B {ECO:0000313|EMBL:AGZ38779.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_569_19
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21656..22105
DNA (450bp) protein (150aa)
Endo-1,3-beta-glucanase Tax=Streptomyces griseoflavus Tu4000 RepID=D9Y0V6_9ACTO
Endo-1,3-beta-glucanase {ECO:0000313|EMBL:EFL37893.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
PLM1_60_b1_redo_sep16_scaffold_569_20
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21947..22399)
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B8P8_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87858.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_569_21
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22421..23023
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B8P7_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87857.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_569_22
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23606..27586
DNA (3981bp) protein (1327aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003608108
Alpha-L-rhamnosidase A
Alpha-L-rhamnosidase A {ECO:0000313|EMBL:EAU67552.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM1_60_b1_redo_sep16_scaffold_569_23
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27713..29218
DNA (1506bp) protein (502aa)
Rhamnose kinase Tax=Streptomyces griseoaurantiacus M045 RepID=F3NEZ6_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61444.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
rhamnulokinase
PLM1_60_b1_redo_sep16_scaffold_569_24
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29328..29543
DNA (216bp) protein (72aa)
hypothetical protein Tax=Promicromonospora sukumoe RepID=UPI0003752946
D-ribose transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGG48859.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
Displaying 25 items

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