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PLM1_60_b1_redo_sep16_scaffold_583

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_583_1
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..2072)
DNA (2070bp) protein (690aa)
Peroxinectin {ECO:0000313|EMBL:CEL20263.1}; EC=1.11.1.7 {ECO:0000313|EMBL:CEL20263.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
peroxidase (EC:1.11.1.7)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000372D059
PLM1_60_b1_redo_sep16_scaffold_583_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2360..5113)
DNA (2754bp) protein (918aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SD61_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB76410.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_583_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5157..5984)
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GXW3_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:EXG79522.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_583_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6027..7361
DNA (1335bp) protein (445aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000366D7A3
Nitrate/nitrite transporter {ECO:0000313|EMBL:EXG79521.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
major facilitator transporter
PLM1_60_b1_redo_sep16_scaffold_583_5
unknown

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7408..7872
DNA (465bp) protein (155aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_583_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7876..8559
DNA (684bp) protein (228aa)
Futalosine hydrolase {ECO:0000256|HAMAP-Rule:MF_00991}; Short=FL hydrolase {ECO:0000256|HAMAP-Rule:MF_00991};; EC=3.2.2.26 {ECO:0000256|HAMAP-Rule:MF_00991};; Futalosine nucleosidase {ECO:0000256|HAMAP-Rule:MF_00991}; Menaquinone biosynthetic enzyme MqnB {ECO:0000256|HAMAP-Rule:MF_00991}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Futalosine nucleosidase Tax=Micromonospora sp. (strain L5) RepID=E8SBS6_MICSL
futalosine nucleosidase
PLM1_60_b1_redo_sep16_scaffold_583_7
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8556..9380
DNA (825bp) protein (275aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
1,4-dihydroxy-6-naphthoate synthase Tax=Micromonospora sp. CNB394 RepID=UPI00037DE39F
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_583_8
unknown

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9475..9762
DNA (288bp) protein (96aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_583_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9759..10145)
DNA (387bp) protein (129aa)
Cold-shock protein, DNA-binding Tax=Micromonospora lupini str. Lupac 08 RepID=I0KVJ4_9ACTO
Cold shock protein {ECO:0000313|EMBL:EXG79516.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
cold-shock DNA-binding domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_583_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10290..10529
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X805_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:EXG79515.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_583_11
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10526..11956)
DNA (1431bp) protein (477aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003769388
Haloacid dehalogenase domain-containing protein hydrolase
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ADB34926.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_583_12
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12065..12604)
DNA (540bp) protein (180aa)
Predicted protein Tax=Streptomyces sp. C RepID=D9VP94_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL18437.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
Acetyltransferase
PLM1_60_b1_redo_sep16_scaffold_583_13
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12601..13908)
DNA (1308bp) protein (436aa)
hypothetical protein Tax=Streptomyces sp. CNY243 RepID=UPI00037FA077
Uncharacterized protein {ECO:0000313|EMBL:AKH83683.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
putative tetratricopeptide repeat protein
PLM1_60_b1_redo_sep16_scaffold_583_14
unknown

Not on your lists

14152..14436
DNA (285bp) protein (95aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_583_15
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14990..15958
DNA (969bp) protein (323aa)
hypothetical protein Tax=Streptomyces sp. CNB091 RepID=UPI00037A0430
delta-aminolevulinic acid dehydratase
Tax=RBG_13_Planctomycetes_63_9_curated
PLM1_60_b1_redo_sep16_scaffold_583_16
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16011..16598
DNA (588bp) protein (196aa)
hypothetical protein Tax=Streptomyces sp. CNB091 RepID=UPI00036A3285
O-methyltransferase {ECO:0000313|EMBL:EDY52631.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
O-methyltransferase family protein
PLM1_60_b1_redo_sep16_scaffold_583_17
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16603..17541
DNA (939bp) protein (313aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Porphobilinogen deaminase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AYY4_FRADG
porphobilinogen deaminase
PLM1_60_b1_redo_sep16_scaffold_583_18
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18097..18807)
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PNM5_KRIFD
Uncharacterized protein {ECO:0000313|EMBL:CCH74479.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_583_19
unknown

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comp(18812..19018)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_583_20
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(19530..20117)
DNA (588bp) protein (196aa)
Uncharacterized protein Tax=Caulobacter sp. AP07 RepID=J2Q3H4_9CAUL
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM1_60_b1_redo_sep16_scaffold_583_21
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20121..21767)
DNA (1647bp) protein (549aa)
yngI; short-chain acyl-CoA synthetase (EC:6.2.1.-)
Short-chain acyl-CoA synthetase {ECO:0000313|EMBL:CCG01599.1}; EC=6.2.1.- {ECO:0000313|EMBL:CCG01599.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Short-chain acyl-CoA synthetase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RQS2_BLASD
PLM1_60_b1_redo_sep16_scaffold_583_22
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22364..23365
DNA (1002bp) protein (334aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000374003E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91671.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_583_23
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23611..23952)
DNA (342bp) protein (114aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
Putative uncharacterized protein Tax=Frankia sp. (strain CcI3) RepID=Q2JAV5_FRASC
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_583_24
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23988..24275)
DNA (288bp) protein (96aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
Putative uncharacterized protein Tax=Frankia sp. (strain CcI3) RepID=Q2JAV5_FRASC
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_583_25
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24889..25491)
DNA (603bp) protein (201aa)
Methyltransferase type 11 Tax=Nocardiopsis RepID=D7B4G8_NOCDD
Uncharacterized protein {ECO:0000313|EMBL:KGH45553.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
type 11 methyltransferase
PLM1_60_b1_redo_sep16_scaffold_583_26
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25740..26177)
DNA (438bp) protein (146aa)
Putative uncharacterized protein Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UZF9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGD41508.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_583_27
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26516..27106)
DNA (591bp) protein (197aa)
Putative transcriptional regulator Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=Q7W597_BORPA
Uncharacterized protein {ECO:0000313|EMBL:ETK36694.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_583_28
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27178..28098
DNA (921bp) protein (307aa)
luciferase Tax=Saccharopolyspora spinosa RepID=UPI000237A112
Luciferase-like, subgroup
Luciferase-like, subgroup {ECO:0000313|EMBL:AIJ21830.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_583_29
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28418..28726
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Streptomyces niveus NCIMB 11891 RepID=V6JHI3_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST19352.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
cytidine deaminase
Displaying 29 items

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