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PLM1_60_b1_redo_sep16_scaffold_588

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_588_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(240..3608)
DNA (3369bp) protein (1123aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJF1_NAKMY
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACV78616.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
peptidase S8/S53 subtilisin kexin sedolisin
PLM1_60_b1_redo_sep16_scaffold_588_2
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3890..4387)
DNA (498bp) protein (166aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000378894C
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AEK38944.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_588_3
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4513..5178
DNA (666bp) protein (222aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6H7W1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETK37509.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_588_4
unknown

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5194..5325
DNA (132bp) protein (44aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_588_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5429..5854)
DNA (426bp) protein (142aa)
Cytosine/adenosine deaminase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3B4_STRRD
cytosine/adenosine deaminase
Cytosine/adenosine deaminase {ECO:0000313|EMBL:ACZ87430.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_588_6
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5851..6726)
DNA (876bp) protein (292aa)
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3B5_STRRD
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein {ECO:0000313|EMBL:ACZ87431.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_588_7
unknown

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comp(6841..7140)
DNA (300bp) protein (100aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_588_8
unknown

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comp(7548..8012)
DNA (465bp) protein (155aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_588_9
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8033..8608)
DNA (576bp) protein (192aa)
Putative methyltransferase Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YMF7_NOCFA
methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAD60634.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
PLM1_60_b1_redo_sep16_scaffold_588_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8922..9410)
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8R9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01249.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM1_60_b1_redo_sep16_scaffold_588_11
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9602..11692)
DNA (2091bp) protein (697aa)
Putative membrane protein Tax=Streptomyces davawensis JCM 4913 RepID=K4QTC9_9ACTO
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCK26181.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_60_b1_redo_sep16_scaffold_588_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11805..12500)
DNA (696bp) protein (232aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI000375B80D
LuxR family transcriptional regulator {ECO:0000313|EMBL:ETK34378.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
LuxR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_588_13
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12504..13661)
DNA (1158bp) protein (386aa)
Integral membrane sensor signal transduction histidine kinase Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F3Y0_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KIA62946.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
integral membrane sensor signal transduction histidine kinase
PLM1_60_b1_redo_sep16_scaffold_588_14
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14123..14803
DNA (681bp) protein (227aa)
CBS domain protein Tax=Saccharopolyspora erythraea RepID=A4FFD7_SACEN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQD81939.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM1_60_b1_redo_sep16_scaffold_588_15
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15276..16250
DNA (975bp) protein (325aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B4E9_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ83635.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_588_16
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16463..17707)
DNA (1245bp) protein (415aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00036A594C
TIGR02679 family protein {ECO:0000313|EMBL:EKX67798.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_588_17
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17781..21974)
DNA (4194bp) protein (1398aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037AAC80
TIGR02680 family protein {ECO:0000313|EMBL:EKX67783.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_588_18
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21980..23389)
DNA (1410bp) protein (470aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00038256B9
Uncharacterized protein {ECO:0000313|EMBL:EGX60929.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_588_19
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23386..24978)
DNA (1593bp) protein (531aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI0003818221
Uncharacterized protein {ECO:0000313|EMBL:EGX60930.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_588_20
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25740..26117
DNA (378bp) protein (126aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00035D8AB9
Uncharacterized protein {ECO:0000313|EMBL:EWM15625.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_588_21
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26320..26631)
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GZ63_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL86050.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_588_22
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26992..27333)
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3IW00_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP84928.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_60_b1_redo_sep16_scaffold_588_23
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27717..28622
DNA (906bp) protein (302aa)
helZ; Putative helicase HelZ (EC:3.6.-.-)
Putative helicase HelZ Tax=Mycobacterium canettii CIPT 140070017 RepID=L0QY03_9MYCO
Helicase HelZ {ECO:0000313|EMBL:AIH67324.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
Displaying 23 items

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