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PLM1_60_b1_redo_sep16_scaffold_631

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_631_1
unknown

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_631_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

401..1441
DNA (1041bp) protein (347aa)
membrane protein Tax=Actinoplanes globisporus RepID=UPI0003771AA9
Putative permease {ECO:0000313|EMBL:EXG80444.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
permease
PLM1_60_b1_redo_sep16_scaffold_631_3
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1438..2169
DNA (732bp) protein (244aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP71183.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_631_4
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2226..2693)
DNA (468bp) protein (156aa)
Fur family transcriptional regulator Tax=Streptomyces vitaminophilus RepID=UPI00037BA29F
Fur family transcriptional regulator {ECO:0000313|EMBL:KJY38684.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
putative ferric uptake regulator
PLM1_60_b1_redo_sep16_scaffold_631_5
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2690..3022)
DNA (333bp) protein (111aa)
ArsR family transcriptional regulator Tax=Mycobacterium avium RepID=UPI00036053B1
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AEF35569.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
PLM1_60_b1_redo_sep16_scaffold_631_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3066..3953)
DNA (888bp) protein (296aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003723399
ABC-type Mn2+/Zn2+ transport system, permease component {ECO:0000313|EMBL:EXG80448.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Chelated iron transport system membrane protein yfeD
PLM1_60_b1_redo_sep16_scaffold_631_7
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3950..4720)
DNA (771bp) protein (257aa)
Abc transporter related protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F534_VERMA
ABC transporter
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60609.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
PLM1_60_b1_redo_sep16_scaffold_631_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4717..5634)
DNA (918bp) protein (306aa)
ABC-type metal ion transport system, periplasmic component/surface adhesin Tax=Micromonospora lupini str. Lupac 08 RepID=I0LA44_9ACTO
ABC-type metal ion transport system, periplasmic component/surface adhesin {ECO:0000313|EMBL:EXG80450.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
periplasmic solute binding protein
PLM1_60_b1_redo_sep16_scaffold_631_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5695..5967)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7AYJ7_NOCDD
Uncharacterized protein {ECO:0000313|EMBL:EXG80451.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_631_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6028..6423
DNA (396bp) protein (132aa)
antibiotic biosynthesis monooxygenase Tax=Actinoplanes globisporus RepID=UPI00036137F6
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EXG80452.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
antibiotic biosynthesis monooxygenase
PLM1_60_b1_redo_sep16_scaffold_631_11
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6503..7243
DNA (741bp) protein (247aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003783592
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62030.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_631_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7339..8721
DNA (1383bp) protein (461aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase Tax=Thermobifida fusca RepID=SYG_THEFY
PLM1_60_b1_redo_sep16_scaffold_631_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8860..9828)
DNA (969bp) protein (323aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000360890D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB46710.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_631_14
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10103..10927)
DNA (825bp) protein (275aa)
Putative Aminoglycoside phosphotransferase {ECO:0000313|EMBL:CCI53712.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
phosphotransferase enzyme family protein
PLM1_60_b1_redo_sep16_scaffold_631_15
unknown

Not on your lists

comp(11162..11494)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_631_16
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11514..12122
DNA (609bp) protein (203aa)
Ribokinase family sugar kinase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BDK2_STRRD
ribokinase family sugar kinase
Ribokinase family sugar kinase {ECO:0000313|EMBL:ACZ86291.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_631_17
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12162..13118
DNA (957bp) protein (319aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI00037E0AC3
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family {ECO:0000313|EMBL:EXG80457.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_631_18
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13207..14076)
DNA (870bp) protein (290aa)
hypothetical protein Tax=Nocardiopsis lucentensis RepID=UPI000348D535
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ADB75768.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_631_19
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14192..15340
DNA (1149bp) protein (383aa)
tRNA-dihydrouridine synthase Tax=Frankia sp. Iso899 RepID=UPI0003B70028
Putative TIM-barrel protein, nifR3 family {ECO:0000313|EMBL:EXG80462.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_631_20
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15412..17094)
DNA (1683bp) protein (561aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034B9630
phosphotransferase enzyme family protein
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:AFR05868.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
PLM1_60_b1_redo_sep16_scaffold_631_21
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17181..17588)
DNA (408bp) protein (136aa)
Periplasmic oligopeptide-binding protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S058_ACTS5
Periplasmic oligopeptide-binding protein
Periplasmic oligopeptide-binding protein {ECO:0000313|EMBL:AEV88366.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_631_22
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17786..19885)
DNA (2100bp) protein (700aa)
Serine/threonine protein kinase Tax=Frankia sp. QA3 RepID=I8QUF1_9ACTO
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EXG80464.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
serine/threonine protein kinase
PLM1_60_b1_redo_sep16_scaffold_631_23
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19962..20639
DNA (678bp) protein (226aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00037D2A73
Uncharacterized protein {ECO:0000313|EMBL:KDN84486.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_631_24
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20801..23506
DNA (2706bp) protein (902aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:EXG80465.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EXG80465.1};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Pyruvate, phosphate dikinase (EC:2.7.9.1)
pyruvate phosphate dikinase Tax=Longispora albida RepID=UPI00037AB27C
PLM1_60_b1_redo_sep16_scaffold_631_25
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23530..23898
DNA (369bp) protein (123aa)
Cupin 2 conserved barrel domain protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9T0_GEOOG
Cupin 2 barrel domain-containing protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADB73793.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_631_26
unknown

Not on your lists

comp(23901..24125)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_631_27
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24321..25559
DNA (1239bp) protein (413aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0LA29_9ACTO
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
putative deoxyguanosinetriphosphate triphosphohydrolase
PLM1_60_b1_redo_sep16_scaffold_631_28
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25581..26810
DNA (1230bp) protein (410aa)
Ferredoxin reductase Tax=Streptomyces sp. Mg1 RepID=B4V114_9ACTO
Ferredoxin reductase {ECO:0000313|EMBL:EDX21651.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_631_29
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26816..27340
DNA (525bp) protein (175aa)
Putative uncharacterized protein Tax=Ralstonia solanacearum K60-1 RepID=H5W9H7_RALSL
Putative uncharacterized protein {ECO:0000313|EMBL:CCF96448.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum K60-1.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_631_30
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27433..27756
DNA (324bp) protein (108aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI0003829F83
DNA primase
Displaying 30 items

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