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PLM1_60_b1_redo_sep16_scaffold_1013

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1013_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(491..1669)
DNA (1179bp) protein (393aa)
ROK family protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SF06_NOCSJ
ROK family protein
ROK family protein {ECO:0000313|EMBL:ABL80391.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM1_60_b1_redo_sep16_scaffold_1013_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1858..3177
DNA (1320bp) protein (440aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SF07_NOCSJ
extracellular solute-binding protein
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABL80392.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM1_60_b1_redo_sep16_scaffold_1013_3
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3186..4112
DNA (927bp) protein (309aa)
Binding-protein-dependent transport systems inner membrane component Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PZ83_CATAD
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACU71540.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_60_b1_redo_sep16_scaffold_1013_4
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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4109..4957
DNA (849bp) protein (283aa)
Binding-protein-dependent transport systems inner membrane component Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PZ84_CATAD
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACU71541.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_60_b1_redo_sep16_scaffold_1013_5
unknown

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5021..5617
DNA (597bp) protein (199aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1013_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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5689..8070
DNA (2382bp) protein (794aa)
preprotein translocase subunit SecD Tax=Streptomyces somaliensis RepID=UPI000299FFBF
Protein-export membrane protein, SecD/SecF family {ECO:0000313|EMBL:EXG80734.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
protein-export membrane protein SecD
PLM1_60_b1_redo_sep16_scaffold_1013_7
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8180..8860
DNA (681bp) protein (227aa)
RNA polymerase Tax=Streptomyces sp. SS RepID=UPI00037E6AB8
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EWM17212.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1013_8
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8857..9597
DNA (741bp) protein (247aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI00036B245D
Anti-sigma factor {ECO:0000313|EMBL:EYU68419.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
putative transmembrane anti-sigma factor
PLM1_60_b1_redo_sep16_scaffold_1013_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9581..10756)
DNA (1176bp) protein (392aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000382D913
sodium/hydrogen exchanger family protein
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:ACZ86797.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_1013_10
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10761..11246)
DNA (486bp) protein (162aa)
potassium transporter TrkA Tax=Actinomadura atramentaria RepID=UPI00036D46F9
TrkA-like protein
Potassium/proton antiporter regulatory subunit, CPA2 family {ECO:0000313|EMBL:KDA41146.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
PLM1_60_b1_redo_sep16_scaffold_1013_11
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11355..11744
DNA (390bp) protein (130aa)
Anti-sigma factor antagonist Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LET1_RUMC1
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) {ECO:0000313|EMBL:EXG79307.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
anti-anti-sigma factor
PLM1_60_b1_redo_sep16_scaffold_1013_12
unknown

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comp(11761..11964)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1013_13
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(11936..14617)
DNA (2682bp) protein (894aa)
hypothetical protein Tax=Longispora albida RepID=UPI000364F3D4
Chaperone protein clpB
Chaperone protein clpB {ECO:0000313|EMBL:AEV85738.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_1013_14
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14697..15488
DNA (792bp) protein (264aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037ECB2E
protein serine/threonine phosphatase
Protein serine/threonine phosphatase {ECO:0000313|EMBL:AEB42089.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_1013_15
unknown

Not on your lists

15451..15621
DNA (171bp) protein (57aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1013_16
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15791..16384
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C102_STRBB
Uncharacterized protein {ECO:0000313|EMBL:EXU61910.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1013_17
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16387..17106
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C103_STRBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI05875.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_60_b1_redo_sep16_scaffold_1013_18
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17109..17804)
DNA (696bp) protein (232aa)
Uridine kinase Tax=Frankia sp. QA3 RepID=I8QRL9_9ACTO
Uridine kinase {ECO:0000313|EMBL:EIV95127.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
uridine kinase
PLM1_60_b1_redo_sep16_scaffold_1013_19
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(17914..20619)
DNA (2706bp) protein (902aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IQ28_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB63823.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
calcium-binding RTX family protein
Displaying 19 items

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