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PLM1_60_b1_redo_sep16_scaffold_1046

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1046_1
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..575
DNA (573bp) protein (191aa)
BNR/Asp-box repeat-containing protein Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WKT5_BURSC
BNR repeat-like domain protein
BNR repeat-like domain protein {ECO:0000313|EMBL:AJX16791.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
PLM1_60_b1_redo_sep16_scaffold_1046_2
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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784..2442
DNA (1659bp) protein (553aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS61882.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
BNR/Asp-box repeat-containing protein
PLM1_60_b1_redo_sep16_scaffold_1046_3
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2555..3211)
DNA (657bp) protein (219aa)
Zn-dependent hydrolase Tax=Frankia sp. BCU110501 RepID=UPI00036697F3
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABW11493.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_1046_4
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3297..5396)
DNA (2100bp) protein (700aa)
beta-glucosidase Tax=Amycolatopsis balhimycina RepID=UPI000379286B
bglX; beta-glucosidase
Beta-glucosidase {ECO:0000313|EMBL:EOD63174.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
PLM1_60_b1_redo_sep16_scaffold_1046_5
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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5661..5966
DNA (306bp) protein (102aa)
HesB/YadR/YfhF-family protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RRK3_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65377.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hesb/yadr/yfhf family protein
PLM1_60_b1_redo_sep16_scaffold_1046_6
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6026..6205)
DNA (180bp) protein (60aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000363A044
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH31073.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_1046_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6223..6858
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AR46_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ88387.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_1046_8
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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7004..9994
DNA (2991bp) protein (997aa)
UvrABC system protein A Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FGI2_VERMA
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
uvrA; excinuclease ABC subunit A
PLM1_60_b1_redo_sep16_scaffold_1046_9
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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10209..10721
DNA (513bp) protein (171aa)
Rieske (2Fe-2S) domain protein Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6W8I1_ACTMD
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ACU39028.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_60_b1_redo_sep16_scaffold_1046_10
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10790..12004)
DNA (1215bp) protein (405aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
Sensor protein cutS Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H8Q7_STRPR
integral membrane sensor signal transduction histidine kinase
PLM1_60_b1_redo_sep16_scaffold_1046_11
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(12001..12645)
DNA (645bp) protein (215aa)
Two-component regulator CutR Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3C390_STRMB
Two-component regulator CutR {ECO:0000313|EMBL:EME98420.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
cutR; Transcriptional regulatory protein CutR
PLM1_60_b1_redo_sep16_scaffold_1046_12
Streptomyces filamentosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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12784..13338
DNA (555bp) protein (185aa)
hypothetical protein Tax=Streptomyces sp. Wigar10 RepID=UPI00031978A1
Uncharacterized protein {ECO:0000313|EMBL:EWS93669.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseosporus NRRL 11379.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1046_13
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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13533..14570
DNA (1038bp) protein (346aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2P6E5_9ACTO
Peptidoglycan-binding protein {ECO:0000313|EMBL:KHD75238.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
peptidoglycan-binding domain 1 protein
PLM1_60_b1_redo_sep16_scaffold_1046_14
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14567..15268
DNA (702bp) protein (234aa)
peptide ABC transporter ATP-binding protein Tax=Actinopolymorpha alba RepID=UPI000376E1C6
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETK32993.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1046_15
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15255..16472
DNA (1218bp) protein (406aa)
ABC transporter permease Tax=Micromonospora lupini str. Lupac 08 RepID=I0LDZ7_9ACTO
ABC transporter permease {ECO:0000313|EMBL:ETK35543.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
ABC transporter
PLM1_60_b1_redo_sep16_scaffold_1046_16
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(16540..16701)
DNA (162bp) protein (54aa)
Uncharacterized protein Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X2R9_SALTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP53169.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_1046_17
Dactylosporangium aurantiacum, Dactylosporangium, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16712..17410)
DNA (699bp) protein (233aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000371091B
Putative uncharacterized protein {ECO:0000313|EMBL:ADU86027.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Dactylosporangium.;" source="Dactylosporangium aurantiacum subsp. hamdenensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1046_18
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17542..18114
DNA (573bp) protein (191aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037030F5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP55936.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_1046_19
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18186..19142
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GZF7_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL86144.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_1046_20
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19180..20991
DNA (1812bp) protein (604aa)
UvrABC system protein C Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FGH9_VERMA
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
excinuclease ABC subunit C
Displaying 20 items

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